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WormBase Tree Display for Gene: WBGene00039202

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Name Class

WBGene00039202SMapS_parentSequencecb25.fpc4153
IdentityVersion2
NameCGC_nameCbr-dpy-27From_analysisInferred_from_orthology
Sequence_nameCBG20143
Molecular_nameCBG20143
CBG20143.1
CBP41405
Other_nameCBG_20143Accession_evidenceNDBHE601175
Public_nameCbr-dpy-27
DB_infoDatabaseNDBlocus_tagCBG_20143
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-dpy-27
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:000000211.2647From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.4415From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.7578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.3094From_analysisRNASeq.briggsae.WBls:0000002.control_median
10.9197From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.35418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003107.076From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
120.254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
93.8985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
103.936From_analysisRNASeq.briggsae.WBls:0000003.control_mean
97.6552From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000488.2035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
90.0123From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
91.821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
80.8764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
88.2954From_analysisRNASeq.briggsae.WBls:0000004.control_mean
90.1843From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
90.3919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.6451From_analysisRNASeq.briggsae.WBls:0000027.control_mean
22.544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.4587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.93262From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.659From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.7383From_analysisRNASeq.briggsae.WBls:0000027.control_median
23.7005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003527.3285From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.2169From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.1414From_analysisRNASeq.briggsae.WBls:0000038.control_median
15.2599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
17.1594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.42545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.02293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.0102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
13.7911From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.9628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
14.0066From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.0505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.1409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
11.7859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.4159From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.8743From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.54529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.9074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.54476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.61731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.12729From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.23918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.28719From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.47907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.81917From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.8723From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010114.0505From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.6089From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.6552From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.7797From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142676
00142677
00142678
00142679
Ortholog (31)
ParalogWBGene00037531Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00025953Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027382Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031381Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033905Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034001Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035775Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039459Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041955Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00270354Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in chromosome organization. Predicted to be located in chromosome. Is an ortholog of C. elegans dpy-27. In C. elegans, dpy-27 is involved in dosage compensation by hypoactivation of X chromosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20143
Corresponding_CDS_historyCBG20143:bp194
CBG20143:bp255
Corresponding_transcriptCBG20143.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1062503
Microarray_resultsGPL8303_CB6_WBGene00039202_A
GPL8303_CB6_WBGene00039202_B
GPL14143_CBG20143_3614-3673_0.867_38_C
GPL14143_CBG20143_3777-3836_0.870_35_B
GPL14143_CBG20143_3911-3970_0.909_21_A
MethodGene