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WormBase Tree Display for Gene: WBGene00039352

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Name Class

WBGene00039352SMapS_parentSequencecb25.fpc4180
IdentityVersion2
NameSequence_nameCBG20347
Molecular_nameCBG20347
CBG20347.1
CBP44954
Other_nameCBG_20347Accession_evidenceNDBHE601396
CBG_20348
Public_nameCBG20347
DB_infoDatabaseNDBlocus_tagCBG_20347
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
231 Aug 2016 10:29:43WBPerson4025EventAcquires_mergeWBGene00039353
Acquires_mergeWBGene00039353
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00128569
WBVar00128570
WBVar00128571
WBVar00128567
WBVar00128568
RNASeq_FPKMWBls:000000223.2659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
23.2867From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.4652From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.5648From_analysisRNASeq.briggsae.WBls:0000002.control_median
30.9249From_analysisRNASeq.briggsae.WBls:0000002.control_mean
47.3038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003103.053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
75.0335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
89.0433From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
90.5395From_analysisRNASeq.briggsae.WBls:0000003.control_mean
93.5321From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000463.1627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
63.964From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
64.7652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
56.181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
61.9346From_analysisRNASeq.briggsae.WBls:0000004.control_mean
62.1508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
63.4135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.181525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.430996From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.91849From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.14295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.573378From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.71576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.867808From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.85195From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.21779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.28607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.30408From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.86344From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.32209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.62782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004114.1925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
52.385From_analysisRNASeq.briggsae.WBls:0000041.control_mean
62.8588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
64.2862From_analysisRNASeq.briggsae.WBls:0000041.control_median
65.7137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
66.775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
23.548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
23.8644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
42.8254From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.3616From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006326.0788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
28.3105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
30.406From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
32.9497From_analysisRNASeq.briggsae.WBls:0000063.control_mean
34.0224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
45.9307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
32.2142From_analysisRNASeq.briggsae.WBls:0000063.control_median
33.5834From_analysisRNASeq.briggsae.WBls:0000063.control_mean
36.7517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010123.2659From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.704From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.9716From_analysisRNASeq.briggsae.total_over_all_stages.control_median
31.1021From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (31)
Paralog (220)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Nuclear hormone receptor-like domain superfamily; Ligand-binding domain of nuclear hormone receptor; and Nuclear hormone receptor, ligand-binding domain. Is an ortholog of C. elegans D1054.5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20347
Corresponding_CDS_historyCBG20347:bp194
CBG20347:bp255
Corresponding_transcriptCBG20347.1
Other_sequenceCR04255
CR01742
CGC00759_1
CBC03693_1
CRC12504_1
Experimental_infoExpr_patternExpr1055126
Microarray_resultsGPL8303_CB6_WBGene00039352_A
GPL14143_CBG20347_537-596_0.916_3_C
GPL14143_CBG20347_609-668_0.934_2_B
GPL14143_CBG20347_669-728_0.947_1_A
MethodGene