WormBase Tree Display for Gene: WBGene00039464

WBGene00039464 SMap: S_parent: Sequence: cb25.fpc4184
  Identity: Version: 2
    Name: CGC_name: Cbr-unc-38 From_analysis: Inferred_from_orthology
      Sequence_name: CBG20491
      Molecular_name: CBG20491
        CBG20491.1
        CBP35779
      Other_name: CBG_20491 Accession_evidence: NDB HE601012
      Public_name: Cbr-unc-38
    DB_info: Database: NDB locus_tag CBG_20491
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:09 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-unc-38
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 2.18021 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        3.03177 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3.36258 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        4.87576 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.87901 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        2.60599 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        2.99169 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.326695 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.618154 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.909613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.412103 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        1e-06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 3.76873 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        4.45689 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        5.14505 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        3.67069 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        4.36317 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        4.53258 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        4.69881 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.319511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.902917 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2.32226 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.74434 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.23249 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.32363 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        5.96318 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 3.40195 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.453774 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        1.99885 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        2.37622 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        2.60646 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        3.21406 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        3.83819 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 1.22042 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.32622 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.42067 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.51511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.95871 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.7731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.60894 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.6441 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.80171 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        4.01708 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.899044 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.09087 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        1.66181 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.91291 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.13466 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.27158 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.54423 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        1.64222 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.72857 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 2.18021 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.65626 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        2.65167 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.81944 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00142948
      00142949
      00142950
      00142951
      00142952
      00142953
      00142954
      00142955
    Ortholog (36)
    Paralog (104)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-38. In C. elegans, unc-38 is involved in several processes, including calcium ion import across plasma membrane; neuromuscular synaptic transmission; and regulation of multicellular organismal process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG20491
    Corresponding_CDS_history: CBG20491:bp194
    Corresponding_transcript: CBG20491.1
    Other_sequence (47)
  Experimental_info: Expr_pattern: Expr1059499
    Microarray_results: GPL8303_CB6_WBGene00039464_A
      GPL8303_CB6_WBGene00039464_B
      GPL14143_CBG20491_951-1010_0.756_119_C
      GPL14143_CBG20491_1363-1422_0.750_128_B
      GPL14143_CBG20491_1495-1554_0.869_26_A
  Method: Gene