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WormBase Tree Display for Gene: WBGene00040142

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Name Class

WBGene00040142SMapS_parentSequencecb25.fpc4238
IdentityVersion2
NameCGC_nameCbr-wts-1From_analysisInferred_from_orthology
Sequence_nameCBG21338
Molecular_nameCBG21338
CBG21338.1
CBP05074
Other_nameCBG_21338Accession_evidenceNDBHE601293
Public_nameCbr-wts-1
DB_infoDatabaseNDBlocus_tagCBG_21338
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-wts-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classwts
AlleleWBVar00044654
RNASeq_FPKMWBls:00000027.77471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.29892From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.68526From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.98215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.4118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.11689From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.14054From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000320.8297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
22.8365From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.8432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
23.2052From_analysisRNASeq.briggsae.WBls:0000003.control_mean
23.9427From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000429.6678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
30.4853From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
31.3028From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
29.1615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.7454From_analysisRNASeq.briggsae.WBls:0000004.control_mean
33.9164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
34.6784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.71052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.5546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.53576From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.93363From_analysisRNASeq.briggsae.WBls:0000027.control_mean
18.3961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.54518From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.04924From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003515.3003From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.2572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
13.7472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.9767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.72238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.92587From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.98979From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000417.33297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.17468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.18569From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.19669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.33346From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.62951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.3656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
11.0831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.9131From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.13043From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006311.2054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.53033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.63765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
8.14953From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.38736From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.41391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.54388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.89359From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.24678From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010111.8387From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.62951From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.7474From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.7585From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143650
00143651
00143652
00143653
Ortholog (34)
ParalogWBGene00028470Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036341Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037831Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00043036Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein serine/threonine kinase activity. Is an ortholog of C. elegans wts-1. In C. elegans, wts-1 is involved in several processes, including apical protein localization; negative regulation of protein import into nucleus; and post-embryonic development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21338
Corresponding_transcriptCBG21338.1
Other_sequence (39)
Experimental_infoExpr_patternExpr1067961
Microarray_resultsGPL8303_CB6_WBGene00040142_A
GPL14143_CBG21338_1742-1801_0.865_44_C
GPL14143_CBG21338_1889-1948_0.887_26_B
GPL14143_CBG21338_2406-2465_0.890_20_A
MethodGene