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WormBase Tree Display for Gene: WBGene00040749

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Name Class

WBGene00040749SMapS_parentSequencecb25.fpc4321
IdentityVersion1
NameSequence_nameCBG22126
Molecular_nameCBG22126
CBG22126.1
CBP33494
Other_nameCBG_22126Accession_evidenceNDBHE601428
Public_nameCBG22126
DB_infoDatabaseNDBlocus_tagCBG_22126
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000215.08From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.6291From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.1677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.63951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.6409From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.8781From_analysisRNASeq.briggsae.WBls:0000002.control_median
20.6762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000343.5068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
56.5795From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
69.6522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
60.2782From_analysisRNASeq.briggsae.WBls:0000003.control_mean
67.6757From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000421.251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
22.6056From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
23.9602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
18.9749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
22.4309From_analysisRNASeq.briggsae.WBls:0000004.control_mean
23.2997From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
24.6685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.6722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.55837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
5.47087From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.23381From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.6911From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.76691From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.06295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003512.8169From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.0208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
11.7359From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
12.5038From_analysisRNASeq.briggsae.WBls:0000038.control_mean
18.9412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.60214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004127.3243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
28.9011From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.0347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
29.3074From_analysisRNASeq.briggsae.WBls:0000041.control_median
29.5802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
29.6654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
28.1223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
29.4303From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.8552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006311.756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
13.7508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.3354From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
14.7423From_analysisRNASeq.briggsae.WBls:0000063.control_mean
15.1722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.6973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
14.1247From_analysisRNASeq.briggsae.WBls:0000063.control_median
14.6043From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010113.7508From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.8577From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.1261From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.8979From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
Paralog (16)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans Y51F10.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22126
Corresponding_CDS_historyCBG22126:bp194
Corresponding_transcriptCBG22126.1
Other_sequenceJI168781.1
ASC18739_1
JO469730.1
AS15585
Oden_isotig28271
Acan_isotig16339
CR07098
CRC06710_1
Hbac_isotig06241
Experimental_infoExpr_patternExpr1056605
Microarray_resultsGPL8303_CB6_WBGene00040749_A
GPL14143_CBG22126_1238-1297_0.903_15_B
GPL14143_CBG22126_1344-1403_0.930_7_C
GPL14143_CBG22126_1447-1506_0.943_4_A
MethodGene