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WormBase Tree Display for Gene: WBGene00040784

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Name Class

WBGene00040784SMapS_parentSequencecb25.fpc4321
IdentityVersion3
NameCGC_nameCbr-adpr-1From_analysisInferred_from_orthology
Sequence_nameCBG22162
Molecular_nameCBG22162
CBG22162.1
CBP43353
Other_nameCBG_22162Accession_evidenceNDBHE601428
Public_nameCbr-adpr-1
DB_infoDatabaseNDBlocus_tagCBG_22162
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-adpr-1
324 Jul 2008 11:56:30WBPerson1847EventAcquires_mergeWBGene00040782
Acquires_mergeWBGene00040782
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classadpr
RNASeq_FPKMWBls:000000210.2191From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.8031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.05248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.80185From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
7.7212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.26153From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.59466From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000315.2996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.6161From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
15.9327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
16.5872From_analysisRNASeq.briggsae.WBls:0000003.control_mean
18.5294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000047.57594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
7.91604From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
8.25613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.8454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.25915From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.81365From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.13161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.490492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.0824From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.12705From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.80827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.76084From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.45511From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.43929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.47359From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000382.04123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.67902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.72283From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.52603From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.37304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.79804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004116.725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.8683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.0609From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.0912From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.3142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
17.3363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
17.3253From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.3837From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.0709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
21.9874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.8093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.53164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.60038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.32802From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.22292From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.84526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.1969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.08664From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.71858From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001017.84526From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.86142From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.25764From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.68849From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00030324Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040783Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; Tetratricopeptide-like helical domain superfamily; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans adpr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22162
Corresponding_CDS_historyCBG22162:bp194
CBG22162:bp195
CBG22162:bp255
Corresponding_transcriptCBG22162.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1063973
Expr1069469
Microarray_resultsGPL8303_CB6_WBGene00040782_A
GPL8303_CB6_WBGene00040782_B
GPL8303_CB6_WBGene00040783_A
GPL8303_CB6_WBGene00040783_B
GPL8303_CB6_WBGene00040784_A
GPL8303_CB6_WBGene00040784_B
GPL14143_CBG22161_368-427_0.963_1_A
GPL14143_CBG22162_795-854_0.881_35_B
GPL14143_CBG22162_1009-1068_0.895_17_C
GPL14143_CBG22162_1362-1421_0.834_72_A
MethodGene