WormBase Tree Display for Gene: WBGene00041303

WBGene00041303 SMap: S_parent: Sequence: cb25.fpc4426a
  Identity: Version: 1
    Name: Sequence_name: CBG22840
      Molecular_name: CBG22840
        CBG22840.1
        CBP40100
      Other_name: CBG_22840 Accession_evidence: NDB HE600994
      Public_name: CBG22840
    DB_info: Database: NDB locus_tag CBG_22840
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:11 WBPerson1971 Event: Imported: Initial conversion from brigace
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 0.194684 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.692006 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.5734 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        3.8335 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.723688 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.755371 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.36889 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 2.80939 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        2.94496 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        3.08053 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        1.26673 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        2.38555 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 3.84915 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        3.85474 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        3.86033 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        2.85987 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        3.07199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        3.41315 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        3.42441 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.166349 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.14414 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        3.26607 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.116319 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        0.141334 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.887185 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0.584572 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.214668 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.623127 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.770123 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.917118 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.61681 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.71232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.33658 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.456511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.466323 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.48388 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.511248 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.560955 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.536102 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.583151 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.705052 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.928562 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.80378 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.911669 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.24383 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.8634 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.241452 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.57656 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.710059 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.838498 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.37148 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.875084 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.39849 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00144499
      00144500
      00144501
      00144502
    Ortholog (38)
    Paralog (221)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-108 and nhr-176. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG22840
    Corresponding_CDS_history: CBG22840:bp194
      CBG22840:bp255
    Corresponding_transcript: CBG22840.1
  Experimental_info: Expr_pattern: Expr1062814
    Microarray_results: GPL8303_CB6_WBGene00041303_A
      GPL14143_CBG22840_278-337_0.712_54_C
      GPL14143_CBG22840_494-553_0.946_3_B
      GPL14143_CBG22840_657-716_0.946_4_A
  Method: Gene