Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00041332

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00041332SMapS_parentSequencecb25.fpc4426a
IdentityVersion2
NameCGC_nameCbr-nhr-102From_analysisInferred_from_orthology
Sequence_nameCBG22870
Molecular_nameCBG22870
CBG22870.1
CBP40983
Other_nameCBG_22870Accession_evidenceNDBHE600994
Public_nameCbr-nhr-102
DB_infoDatabaseNDBlocus_tagCBG_22870
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-102
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (32)
RNASeq_FPKMWBls:00000024.28128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.8184From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.84652From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.32739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.05284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.37701From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.5639From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000310.512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.84046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
8.17623From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.36755From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.75018From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000047.36001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.62304From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.88606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.67171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.40536From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.80593From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.3031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.106332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.38758From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.28551From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.36263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.8751From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.93389From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.87902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.48306From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.406937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.9013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.08871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.62749From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.64081From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.16628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.91072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.15603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.27362From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.39122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.67192From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.22972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.31047From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.44985From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.4592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.55223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.72554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.31773From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.98259From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.23636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.64415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.32369From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.35351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.66805From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001015.08871From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.48038From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.39329From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.78312From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00144515
00144516
00144517
00144518
Ortholog (30)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-102.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22870
Corresponding_CDS_historyCBG22870:bp194
CBG22870:bp196
CBG22870:bp255
Corresponding_transcriptCBG22870.1
Other_sequenceEX913012.1
EV853396.1
EX558399.1
ACC01226_1
HBC03628_1
EG025451.1
Dviv_isotig27161
Acan_isotig11530
FK808023.1
Hbac_isotig03244
Experimental_infoExpr_patternExpr1053481
Microarray_resultsGPL8303_CB6_WBGene00041332_A
GPL8303_CB6_WBGene00041332_B
GPL14143_CBG22870_900-959_0.911_5_C
GPL14143_CBG22870_1043-1102_0.935_2_B
GPL14143_CBG22870_1099-1158_0.954_1_A
MethodGene