Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00041405

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00041405SMapS_parentSequencecb25.fpc4426b
IdentityVersion3
NameCGC_nameCbr-cit-1.1From_analysisInferred_from_orthology
Sequence_nameCBG22964
Molecular_nameCBG22964a
CBG22964a.1
CBP44599
CBG22964b
CBP46583
CBG22964b.1
Other_nameCBG_22964Accession_evidenceNDBHE600964
CBG_22965
Public_nameCbr-cit-1.1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-cit-1.1
331 Aug 2016 10:29:44WBPerson4025EventAcquires_mergeWBGene00041406
Acquires_mergeWBGene00041406
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcit
Allele (24)
RNASeq_FPKMWBls:000000211.5932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.88641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.75667From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.79041From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.6918From_analysisRNASeq.briggsae.WBls:0000002.control_median
10.841From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.0939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000319.1791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
19.9536From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
20.7282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
21.6924From_analysisRNASeq.briggsae.WBls:0000003.control_mean
25.1699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000421.4904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.9172From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
32.3439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
22.353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
24.1703From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
24.8454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
25.0406From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000271.17339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.1387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.72731From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.6798From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.19176From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.65621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.9239From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000356.73309From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003818.9035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.25675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.48983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.76795From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.04607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.42404From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004122.2878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
24.1957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
24.5471From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.8092From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.8985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
27.8548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
25.0734From_analysisRNASeq.briggsae.WBls:0000041.control_median
25.2483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
25.8272From_analysisRNASeq.briggsae.WBls:0000041.control_mean
30.4783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006315.7333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.8298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.6692From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
20.2563From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
27.3472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.5312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
18.2495From_analysisRNASeq.briggsae.WBls:0000063.control_median
19.1355From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010114.7879From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.7333From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.142From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
17.9842From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00144591
00144592
Ortholog (33)
ParalogWBGene00027217Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035815Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037307Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041404Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041718Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans cit-1.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22964a
CBG22964b
Corresponding_CDS_historyCBG22964:bp194
CBG22964:bp255
Corresponding_transcriptCBG22964a.1
CBG22964b.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1057266
Expr1066238
Microarray_resultsGPL8303_CB6_WBGene00041405_A
GPL8303_CB6_WBGene00041406_A
GPL8303_CB6_WBGene00041406_B
GPL14143_CBG22964_5-64_0.929_3_C
GPL14143_CBG22964_399-458_0.934_2_B
GPL14143_CBG22964_403-462_0.937_1_A
GPL14143_CBG22965_289-348_0.501_99_B
GPL14143_CBG22965_764-823_0.936_5_A
GPL14143_CBG22965_801-860_0.957_1_C
MethodGene