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WormBase Tree Display for Gene: WBGene00041692

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Name Class

WBGene00041692SMapS_parentSequencecb25.fpc4470
IdentityVersion2
NameCGC_nameCbr-nhr-68From_analysisInferred_from_orthology
Sequence_nameCBG23318
Molecular_nameCBG23318
CBG23318.1
CBP05579
Other_nameCBG_23318Accession_evidenceNDBHE601533
Public_nameCbr-nhr-68
DB_infoDatabaseNDBlocus_tagCBG_23318
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-68
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000219.456From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.4835From_analysisRNASeq.briggsae.WBls:0000002.control_mean
46.0421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.95235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.2977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
14.8769From_analysisRNASeq.briggsae.WBls:0000002.control_median
20.937From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000312.5122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
6.03007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.27114From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.98417From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
8.84215From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000421.4271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
21.591From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.7549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
19.7492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
21.2767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
21.3074From_analysisRNASeq.briggsae.WBls:0000004.control_mean
22.3289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.58202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.4925From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.13421From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
46.7613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.3445From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.01741From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.90061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.88964From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.5551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.21498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
26.9948From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.84738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.70124From_analysisRNASeq.briggsae.WBls:0000038.control_median
91.3618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.1053From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.4271From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.0176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
14.4944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.0724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.83662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.62216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.92247From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.84192From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.00832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.33841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.2125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.25436From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.26999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.95519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.46368From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.09004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.23343From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010113.5407From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.25436From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.2089From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.96826From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00144916
00144917
00144918
00144919
Ortholog (25)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-68. In C. elegans, nhr-68 is involved in regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23318
Corresponding_CDS_historyCBG23318:bp194
Corresponding_transcriptCBG23318.1
Other_sequenceEX539396.1
FD514463.1
FD515477.1
FD514165.1
CBC10258_1
CSC00785_1
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00041692_A
GPL8303_CB6_WBGene00041692_C
MethodGene