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WormBase Tree Display for Gene: WBGene00041983

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Name Class

WBGene00041983SMapS_parentSequencecb25.NA_031
IdentityVersion2
NameCGC_nameCbr-nhr-243From_analysisInferred_from_orthology
Sequence_nameCBG23699
Molecular_nameCBG23699
CBG23699.1
CBP41955
Other_nameCBG_23699Accession_evidenceNDBHE601102
Public_nameCbr-nhr-243
DB_infoDatabaseNDBlocus_tagCBG_23699
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-243
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (25)
RNASeq_FPKMWBls:00000023.91837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.18853From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.35498From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.29223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.30317From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.50105From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.64711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000032.53555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.76657From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.99759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.3909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.64135From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000045.16436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.92456From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
8.68477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.71171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.52312From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.84474From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.21004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.836149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.2676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.24003From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.11459From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.95545From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.25366From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.67087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.59229From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.880066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
12.6512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
15.519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.39492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.3613From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.52306From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000412.28346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.60379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.84074From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.07769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.8031From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.24747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.78052From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.81467From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.55165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.91904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.25068From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.86646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.38853From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.87475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.12366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.41216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.94426From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.12749From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001015.86646From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.25174From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.17523From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.37176From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00145227
00145228
00145229
00145230
Ortholog (45)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-243.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23699
Corresponding_CDS_historyCBG23699:bp194
CBG23699:bp255
Corresponding_transcriptCBG23699.1
Other_sequencePT03052
CRC07833_1
CR10659
Experimental_infoExpr_patternExpr1058430
Microarray_resultsGPL8303_CB6_WBGene00041983_A
GPL8303_CB6_WBGene00041983_B
GPL14143_CBG23699_750-809_0.926_2_C
GPL14143_CBG23699_1037-1096_0.680_96_B
GPL14143_CBG23699_1163-1222_0.836_35_A
MethodGene