Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00042027

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00042027SMapS_parentSequencecb25.NA_037
IdentityVersion4
NameCGC_nameCbr-nhr-124.2From_analysisInferred_from_orthology
Sequence_nameCBG23758
Molecular_nameCBG23758a
CBG23758a.1
CBP43181
CBG23758b
CBP12590
CBG23758b.1
Other_nameCBG_23758Accession_evidenceNDBHE601379
CBG_23759
Cbr-nhr-124From_analysisInferred_from_orthology
Public_nameCbr-nhr-124.2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-124
331 Aug 2016 10:29:43WBPerson4025EventAcquires_mergeWBGene00042028
420 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-nhr-124.2
Other_nameCbr-nhr-124
Acquires_mergeWBGene00042028
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00049669
WBVar00049674
WBVar00049659
WBVar00049664
RNASeq_FPKMWBls:00000020.283057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.343058From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.353962From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.435771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.134625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.299128From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.313058From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.053182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.095699From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.138217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.0638From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.084266From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.168531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.052007From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.091502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.349658From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.627196From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.53193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.512489From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.639227From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.67532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.724704From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.199118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.267313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.382807From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.488051From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.498301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.987473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.202987From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.803357From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.862142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.938501From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.01486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.13344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.263794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.349717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.605929From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.637823From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.100013From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.141504From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.172745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.185815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.105751From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.134443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.137974From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001010.283057From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.643874From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.23339From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.534783From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145280
00145281
00145282
00145283
Ortholog (27)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-124.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23758a
CBG23758b
Corresponding_CDS_historyCBG23758:bp194
CBG23758:bp255
Corresponding_transcriptCBG23758a.1
CBG23758b.1
Other_sequenceJI461610.1
Experimental_infoExpr_patternExpr1057127
Expr1058160
Microarray_resultsGPL8303_CB6_WBGene00042027_A
GPL8303_CB6_WBGene00042028_A
GPL8303_CB6_WBGene00042028_B
GPL14143_CBG23758_539-598_0.904_22_C
GPL14143_CBG23758_676-735_0.928_7_B
GPL14143_CBG23758_792-851_0.908_16_A
GPL14143_CBG23759_203-262_0.953_1_C
GPL14143_CBG23759_259-318_0.944_3_A
GPL14143_CBG23759_414-473_0.893_10_B
MethodGene