WormBase Tree Display for Gene: WBGene00042029

WBGene00042029 SMap: S_parent: Sequence: cb25.NA_037
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-157 From_analysis: Inferred_from_orthology
      Sequence_name: CBG23760
      Molecular_name: CBG23760
        CBG23760.1
        CBP41018
      Other_name: CBG_23760 Accession_evidence: NDB HE601379
      Public_name: Cbr-nhr-157
    DB_info: Database: NDB locus_tag CBG_23760
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-nhr-157
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele: WBVar00049684
      WBVar00133321
      WBVar00049699
      WBVar00133322
      WBVar00049704
      WBVar00049689
      WBVar00049694
      WBVar00049679
      WBVar00133320
    RNASeq_FPKM: WBls:0000002 0.184008 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.356388 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.420284 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.464873 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.245164 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.328582 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.332724 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.218371 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.436742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.307174 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.484779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.154034 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.627462 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        1.10089 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.334518 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.35678 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.486574 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.486648 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.115799 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.347396 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.173698 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.691522 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.41869 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.0682 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.180824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.30169 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.325996 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.471167 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.554771 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.074047 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.154794 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.15492 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.157011 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.159229 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.231611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.106737 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.238215 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.70287 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
            RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.020588 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.12353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.180824 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.40393 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.238387 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.446676 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00145284
      00145285
      00145286
      00145287
    Ortholog (21)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-157. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG23760
    Corresponding_CDS_history: CBG23760:bp194
      CBG23760:bp255
    Corresponding_transcript: CBG23760.1
  Experimental_info: Expr_pattern: Expr1061000
    Microarray_results: GPL8303_CB6_WBGene00042029_A
      GPL8303_CB6_WBGene00042029_B
      GPL14143_CBG23760_691-750_0.894_30_C
      GPL14143_CBG23760_801-860_0.934_9_A
      GPL14143_CBG23760_907-966_0.696_135_B
  Method: Gene