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WormBase Tree Display for Gene: WBGene00042137

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Name Class

WBGene00042137SMapS_parentSequencecb25.NA_061
IdentityVersion2
NameCGC_nameCbr-ctps-1From_analysisInferred_from_orthology
Sequence_nameCBG23896
Molecular_nameCBG23896
CBG23896.1
CBP12632
Other_nameCBG_23896Accession_evidenceNDBHE601513
Public_nameCbr-ctps-1
DB_infoDatabaseNDBlocus_tagCBG_23896
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
227 Apr 2012 17:09:23WBPerson2970Name_changeCGC_nameCbr-ctps-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctps
RNASeq_FPKMWBls:000000253.8957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
59.9159From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
66.7965From_analysisRNASeq.briggsae.WBls:0000002.control_mean
86.578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
73.2469From_analysisRNASeq.briggsae.WBls:0000002.control_median
74.8101From_analysisRNASeq.briggsae.WBls:0000002.control_mean
98.8507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003113.272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
70.9385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
92.1052From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
92.8965From_analysisRNASeq.briggsae.WBls:0000003.control_mean
94.4791From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000456.2352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
56.4502From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
56.6652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
57.3765From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
57.5836From_analysisRNASeq.briggsae.WBls:0000004.control_mean
57.5978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
60.0434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002717.1734From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.8669From_analysisRNASeq.briggsae.WBls:0000027.control_mean
54.5722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.85513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
24.1131From_analysisRNASeq.briggsae.WBls:0000027.control_median
27.1634From_analysisRNASeq.briggsae.WBls:0000027.control_mean
31.0527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003539.559From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003834.0493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
39.6047From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
42.17From_analysisRNASeq.briggsae.WBls:0000038.control_median
44.7353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
49.1678From_analysisRNASeq.briggsae.WBls:0000038.control_mean
78.2818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041110.605From_analysisRNASeq.briggsae.WBls:0000041.control_mean
127.759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
131.337From_analysisRNASeq.briggsae.WBls:0000041.control_median
134.914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
135.153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
44.5924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
100.857From_analysisRNASeq.briggsae.WBls:0000041.control_median
57.6307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
73.9556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
95.6674From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
70.2177From_analysisRNASeq.briggsae.WBls:0000063.control_mean
84.3684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
86.2317From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
89.5106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
90.9779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
69.2817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
70.0617From_analysisRNASeq.briggsae.WBls:0000063.control_mean
85.3From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010154.5722From_analysisRNASeq.briggsae.total_over_all_stages.control_median
60.6016From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
57.4871From_analysisRNASeq.briggsae.total_over_all_stages.control_median
62.0451From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145335
00145336
Ortholog (35)
Structured_descriptionAutomated_descriptionPredicted to enable CTP synthase activity. Predicted to be involved in pyrimidine nucleotide biosynthetic process. Is an ortholog of C. elegans ctps-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23896
Corresponding_CDS_historyCBG23896:bp194
CBG23896:bp255
Corresponding_transcriptCBG23896.1
Other_sequence (57)
Experimental_infoExpr_patternExpr1062185
Microarray_resultsGPL8303_CB6_WBGene00042137_A
GPL8303_CB6_WBGene00042137_B
GPL14143_CBG23896_1351-1410_0.904_8_C
GPL14143_CBG23896_1557-1616_0.931_3_A
GPL14143_CBG23896_1648-1707_0.887_19_B
MethodGene