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WormBase Tree Display for Gene: WBGene00042492

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Name Class

WBGene00042492SMapS_parentSequencecb25.NA_146
IdentityVersion2
NameCGC_nameCbr-ung-1From_analysisInferred_from_orthology
Sequence_nameCBG24365
Molecular_nameCBG24365
CBG24365.1
CBP29837
Other_nameCBG_24365Accession_evidenceNDBHE601332
Public_nameCbr-ung-1
DB_infoDatabaseNDBlocus_tagCBG_24365
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-ung-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classung
RNASeq_FPKMWBls:000000213.2482From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.7288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.52739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.48839From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.1409From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.65373From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.81907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.456373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
1.41326From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.37014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.194018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.00684From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.245531From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.491063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.569208From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.728384From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.16639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.41526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.294419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.14877From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.18871From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.12294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.13585From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.61915From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.91048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.57114From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.5654From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.64342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
38.4465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.52From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.08578From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.65157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.17076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.73429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.93834From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.24029From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.74629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.45409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.76697From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.06433From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.39437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.64849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.05278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.68554From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.70931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.1945From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.87636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.69742From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.04716From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.3105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.52739From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.67942From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.78944From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.31412From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145561
00145562
00145563
Ortholog (30)
ParalogWBGene00034107Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable uracil DNA N-glycosylase activity. Predicted to be involved in base-excision repair. Is an ortholog of C. elegans ung-1. In C. elegans, ung-1 is involved in base-excision repair.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24365
Corresponding_CDS_historyCBG24365:bp194
Corresponding_transcriptCBG24365.1
Other_sequenceEX552904.1
Hbac_isotig04018
EY462333.1
EY458287.1
ES411402.1
HBC09034_1
EX535580.1
ACC38587_1
ES740292.1
Experimental_infoExpr_patternExpr1050973
Microarray_resultsGPL8303_CB6_WBGene00042492_A
GPL8303_CB6_WBGene00042492_B
GPL14143_CBG24365_400-459_0.932_1_A
MethodGene