WormBase Tree Display for Gene: WBGene00044032
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| WBGene00044032 | SMap | S_parent | Sequence | T21B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ceh-99 | Person_evidence | WBPerson83 | |||||
| Sequence_name | T21B4.17 | ||||||||
| Molecular_name | T21B4.17 | ||||||||
| T21B4.17.1 | |||||||||
| CE38419 | |||||||||
| Other_name | CELE_T21B4.17 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ceh-99 | ||||||||
| DB_info | Database | AceView | gene | 2M813 | |||||
| WormFlux | gene | WBGene00044032 | |||||||
| NDB | locus_tag | CELE_T21B4.17 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044032|UniProtKB=Q5FC44 | |||||||
| family | PTHR24339 | ||||||||
| NCBI | gene | 188680 | |||||||
| RefSeq | protein | NM_001027181.5 | |||||||
| TREEFAM | TREEFAM_ID | TF343180 | |||||||
| TrEMBL | UniProtAcc | Q5FC44 | |||||||
| UniProt_GCRP | UniProtAcc | Q5FC44 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 15 Dec 2004 12:04:44 | WBPerson1983 | Event | Created | |||
| 2 | 30 Sep 2011 16:40:16 | WBPerson2970 | Name_change | CGC_name | ceh-99 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (173) | |||||||||
| Strain | WBStrain00049279 | ||||||||
| WBStrain00051089 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog | OTIPU.nOt.2.0.1.g08907 | Oscheius tipulae | From_analysis | WormBase-Compara | |||||
| WBGene00093277 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00279481 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00289727 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00000429 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00000430 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000432 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012584 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018022 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018446 | |||||||||
| WBGene00022554 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | ceh-99 is a divergent homeobox gene; it encodes four homeodomains, and is located close to ceh-100 on chromosome II and may be a recent paralog; most homeodomain proteins bind DNA and function as transcription factors; ceh-99 is involved in axonal fasciculation. | Paper_evidence | WBPaper00046864 | |||||
| WBPaper00028984 | |||||||||
| WBPaper00037950 | |||||||||
| WBPaper00045521 | |||||||||
| Person_evidence | WBPerson83 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 19 Apr 2017 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in brain development; neuron differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T21B4.17 | |||||||
| Corresponding_CDS_history | T21B4.17:wp141 | ||||||||
| Corresponding_transcript | T21B4.17.1 | ||||||||
| Associated_feature | WBsf644758 | ||||||||
| WBsf644759 | |||||||||
| WBsf644760 | |||||||||
| WBsf978275 | |||||||||
| WBsf990128 | |||||||||
| WBsf1013450 | |||||||||
| WBsf222274 | |||||||||
| Transcription_factor | WBTranscriptionFactor000918 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00107210 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004754 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15656 | ||||||||
| Expr1027557 | |||||||||
| Expr1040166 | |||||||||
| Expr1157246 | |||||||||
| Expr1170055 | |||||||||
| Expr2009919 | |||||||||
| Expr2028159 | |||||||||
| Drives_construct | WBCnstr00023790 | ||||||||
| WBCnstr00042424 | |||||||||
| WBCnstr00042440 | |||||||||
| Construct_product | WBCnstr00023790 | ||||||||
| Microarray_results | A_12_P155550 | ||||||||
| GPL14144_T21B4.17_1108-1167_0.923_1_C | |||||||||
| GPL14144_T21B4.17_1425-1484_0.916_3_B | |||||||||
| GPL14144_T21B4.17_393-452_0.877_20_A | |||||||||
| GPL19516_CGZ0035811 | |||||||||
| GPL21109_T21B4.17 | |||||||||
| GPL8304_CE_WBGene00044032_A | |||||||||
| GPL8673_T21B4_17P00180 | |||||||||
| GPL8673_T21B4_17P01039 | |||||||||
| GPL8673_T21B4_17P01260 | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction | WBInteraction000535151 | ||||||||
| WBInteraction000542494 | |||||||||
| Map_info | Map | II | Position | 10.2097 | Error | 0.002922 | |||
| Positive | Positive_clone | T21B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00060123 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
