WormBase Tree Display for Gene: WBGene00044121
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| WBGene00044121 | SMap | S_parent | Sequence | C35C5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | gcp-2.3 | Person_evidence | WBPerson683 | ||||||
| Sequence_name | C35C5.11 | |||||||||
| Molecular_name | C35C5.11 | |||||||||
| Other_name | CELE_C35C5.11 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gcp-2.3 | |||||||||
| DB_info | Database | AceView | gene | XM161 | ||||||
| WormFlux | gene | WBGene00044121 | ||||||||
| NDB | locus_tag | CELE_C35C5.11 | ||||||||
| NCBI | gene | 3565896 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 Feb 2005 11:37:29 | WBPerson1983 | Event | Split_from | WBGene00007954 | |||
| 2 | 17 Apr 2013 09:53:02 | WBPerson2970 | Name_change | CGC_name | gcp-2.3 | |||||
| 3 | 20 May 2019 14:57:59 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Split_from | WBGene00007954 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | gcp | |||||||||
| Allele (57) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00036975 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00145937 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00145860 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00190656 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00058269 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00130012 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog | WBGene00007954 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | ||||||||||
| WBGene00020082 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Panther | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; eat-2; and pmk-1 based on tiling array; RNA-seq; and microarray studies. Is affected by multi-walled carbon nanotube and Diazinon based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C35C5.11:wp271 | ||||||||
| Corresponding_pseudogene | C35C5.11 | |||||||||
| Experimental_info | Expr_pattern | Expr1010403 | ||||||||
| Expr1145977 | ||||||||||
| Expr2011971 | ||||||||||
| Expr2030208 | ||||||||||
| Drives_construct | WBCnstr00023750 | |||||||||
| Construct_product | WBCnstr00023750 | |||||||||
| Microarray_results (18) | ||||||||||
| Expression_cluster (33) | ||||||||||
| Map_info | Map | X | Position | 4.35471 | ||||||
| Positive | Positive_clone | C35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00038491 | |||||||||
| WBPaper00055090 | ||||||||||
| WBPaper00066339 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
