WormBase Tree Display for Gene: WBGene00044144
expand all nodes | collapse all nodes | view schema
| WBGene00044144 | SMap | S_parent | Sequence | M153 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | znf-474 | Person_evidence | WBPerson10010 | |||||
| WBPerson10503 | |||||||||
| Sequence_name | M153.4 | ||||||||
| Molecular_name | M153.4 | ||||||||
| M153.4.1 | |||||||||
| CE52828 | |||||||||
| Other_name | CELE_M153.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | znf-474 | ||||||||
| DB_info | Database | AceView | gene | M153.4 | |||||
| WormFlux | gene | WBGene00044144 | |||||||
| NDB | locus_tag | CELE_M153.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044144|UniProtKB=Q565C3 | |||||||
| family | PTHR13555 | ||||||||
| NCBI | gene | 3565375 | |||||||
| RefSeq | protein | NM_001368530.5 | |||||||
| TREEFAM | TREEFAM_ID | TF328720 | |||||||
| TrEMBL | UniProtAcc | Q565C3 | |||||||
| UniProt_GCRP | UniProtAcc | Q565C3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Mar 2005 14:33:10 | WBPerson1846 | Event | Created | |||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | znf-474 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | znf | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00007253 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00020196 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in neurons; rectal epithelial cell; and rectum based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and pgl-1 based on RNA-seq and microarray studies. Is affected by seven chemicals including stavudine; Zidovudine; and Cry5B based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: zinc-finger of a C2HC-type and Zinc finger C2HC domain-containing protein. Is an ortholog of human ZNF474 (zinc finger protein 474). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M153.4 | |||||||
| Corresponding_CDS_history | M153.4:wp268 | ||||||||
| Corresponding_transcript | M153.4.1 | ||||||||
| Other_sequence | Acan_isotig07333 | ||||||||
| Associated_feature | WBsf648591 | ||||||||
| WBsf648592 | |||||||||
| WBsf663399 | |||||||||
| WBsf1007225 | |||||||||
| WBsf236457 | |||||||||
| WBsf236458 | |||||||||
| Experimental_info | Expr_pattern | Expr1023784 | |||||||
| Expr1154680 | |||||||||
| Expr2005248 | |||||||||
| Expr2023466 | |||||||||
| Drives_construct | WBCnstr00023734 | ||||||||
| Construct_product | WBCnstr00023734 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (127) | |||||||||
| Map_info | Map | X | Position | 7.00724 | |||||
| Positive | Positive_clone | M153 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
