WormBase Tree Display for Gene: WBGene00044618
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WBGene00044618 | SMap | S_parent | Sequence | K08D12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | bus-2 | Paper_evidence | WBPaper00036131 | |||
Person_evidence | WBPerson261 | ||||||
WBPerson5119 | |||||||
Sequence_name | K08D12.5 | ||||||
Molecular_name | K08D12.5a | ||||||
K08D12.5a.1 | |||||||
CE44703 | |||||||
K08D12.5b | |||||||
CE44697 | |||||||
K08D12.5b.1 | |||||||
Other_name | CELE_K08D12.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | bus-2 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00019539 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | bus | ||||||
Reference_allele | WBVar00144918 | ||||||
Allele (67) | |||||||
Strain | WBStrain00004657 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (25) | |||||||
Paralog (18) | |||||||
Structured_description | Concise_description | bus-2 encodes a predicted glycosyltransferase that contains conserved domains of core-1 beta1,3 galactosyltransferases; bus-2 is required for bacterial infection, and for fully normal cuticle integrity; specifically, bus-2 is needed both for colonization by Microbacterium nematophilum (and the tail-swelling response to M. nematophilum infection), and for attachment of Yersinia pseudotuberculosis biofilms; bus-2 mutant animals exhibit defects in core-1 O-glycan synthesis, while also showing a concomitant increase in novel fucosyl O-glycans; a bus-2::RFP reporter is expressed in the posterior intestine as well as the hypodermal seam cells and spermatheca. | Paper_evidence | WBPaper00026735 | |||
WBPaper00029153 | |||||||
WBPaper00036131 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 14 Apr 2010 00:00:00 | ||||||
Automated_description | Predicted to enable hexosyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to be located in membrane. Expressed in head muscle; intestine; seam cell; and spermatheca. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K08D12.5a | |||||
K08D12.5b | |||||||
Corresponding_transcript | K08D12.5a.1 | ||||||
K08D12.5b.1 | |||||||
Other_sequence | EY469264.1 | ||||||
ACC22680_1 | |||||||
GP00698 | |||||||
Associated_feature | WBsf718046 | ||||||
WBsf995507 | |||||||
WBsf995508 | |||||||
WBsf1016773 | |||||||
WBsf1016774 | |||||||
WBsf1016775 | |||||||
WBsf227969 | |||||||
Experimental_info | RNAi_result | WBRNAi00016790 | Inferred_automatically | RNAi_primary | |||
WBRNAi00034127 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111025 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050266 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00110997 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9274 | ||||||
Expr12846 | |||||||
Expr1153961 | |||||||
Expr2009688 | |||||||
Expr2027927 | |||||||
Drives_construct | WBCnstr00007656 | ||||||
WBCnstr00007657 | |||||||
Construct_product | WBCnstr00007656 | ||||||
WBCnstr00007657 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (89) | |||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Map | IV | Position | -16.2479 | Error | 0.013651 | |
Positive | Positive_clone | K08D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5457 | |||||
Reference (17) | |||||||
Method | Gene |