WormBase Tree Display for Gene: WBGene00044620
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WBGene00044620 | SMap | S_parent | Sequence | T22B11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | bus-4 | Paper_evidence | WBPaper00037686 | |||
Person_evidence | WBPerson261 | ||||||
Sequence_name | T22B11.2 | ||||||
Molecular_name | T22B11.2 | ||||||
T22B11.2.1 | |||||||
CE46509 | |||||||
Other_name | CELE_T22B11.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | bus-4 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00020676 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | bus | ||||||
Reference_allele | WBVar00144924 | ||||||
Allele (47) | |||||||
Strain | WBStrain00004646 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00032876 | ||||||
00032877 | |||||||
00146092 | |||||||
00146093 | |||||||
Ortholog (39) | |||||||
Paralog (11) | |||||||
Structured_description | Concise_description | bus-4 encodes a galactosyltransferase; bus-4 is required for bacterial infection, and for fully normal cuticle integrity and body size; specifically, bus-4 is needed both for colonization by Microbacterium nematophilum (and the tail-swelling response to M. nematophilum infection) and for attachment of Yersinia pseudotuberculosis biofilms. | Paper_evidence | WBPaper00026735 | |||
WBPaper00029153 | |||||||
WBPaper00037686 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 19 Nov 2010 00:00:00 | ||||||
Automated_description | Predicted to enable glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity. Predicted to be located in membrane. Expressed in intestine; pharynx; and seam cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T22B11.2 | |||||
Corresponding_CDS_history | T22B11.2:wp227 | ||||||
Corresponding_transcript | T22B11.2.1 | ||||||
Other_sequence | CSC00611_1 | ||||||
FK803349.1 | |||||||
FD514461.1 | |||||||
Associated_feature | WBsf660135 | ||||||
WBsf996372 | |||||||
WBsf996373 | |||||||
WBsf1017300 | |||||||
WBsf228232 | |||||||
Experimental_info | RNAi_result | WBRNAi00035782 | Inferred_automatically | RNAi_primary | |||
WBRNAi00070560 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018995 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103538 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053778 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070562 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070563 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070561 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9275 | ||||||
Expr1040290 | |||||||
Expr1157329 | |||||||
Expr2009689 | |||||||
Expr2027928 | |||||||
Drives_construct | WBCnstr00007658 | ||||||
WBCnstr00007659 | |||||||
WBCnstr00023434 | |||||||
Construct_product | WBCnstr00007658 | ||||||
WBCnstr00007659 | |||||||
WBCnstr00023434 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (203) | |||||||
Interaction | WBInteraction000007898 | ||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Map | IV | Position | 0.679726 | Error | 0.00846 | |
Positive | Positive_clone | T22B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5460 | |||||
Reference (16) | |||||||
Method | Gene |