WormBase Tree Display for Gene: WBGene00044621
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| WBGene00044621 | SMap | S_parent | Sequence | F53B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bus-5 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F53B1.4 | ||||||||
| Molecular_name | F53B1.4 | ||||||||
| F53B1.4.1 | |||||||||
| CE04644 | |||||||||
| Other_name | CELE_F53B1.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | bus-5 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_F53B1.4 | |||||
| NCBI | gene | 180525 | |||||||
| RefSeq | protein | NM_075989.3 | |||||||
| TREEFAM | TREEFAM_ID | TF313892 | |||||||
| TrEMBL | UniProtAcc | Q20697 | |||||||
| UniProt_GCRP | UniProtAcc | Q20697 | |||||||
| OMIM | gene | 616146 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 01 Sep 2005 10:24:02 | WBPerson2970 | Event | Created | |||
| 2 | 30 Jul 2020 16:54:45 | WBPerson1983 | Event | Acquires_merge | WBGene00018737 | ||||
| Acquires_merge | WBGene00018737 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bus | ||||||||
| Reference_allele | WBVar00144919 | ||||||||
| Allele | WBVar00144919 | Inferred_automatically | From strain object: CB5612 | ||||||
| WBVar00144932 | Inferred_automatically | From strain object: CB5614 | |||||||
| WBVar02148835 | Inferred_automatically | From strain object: CB6991 | |||||||
| From strain object: CB6992 | |||||||||
| From strain object: DC19 | |||||||||
| WBVar02148846 | Inferred_automatically | From strain object: CB7448 | |||||||
| WBVar00144930 | |||||||||
| WBVar00144935 | |||||||||
| WBVar00144917 | |||||||||
| WBVar00144916 | |||||||||
| WBVar00145006 | |||||||||
| WBVar00145001 | |||||||||
| WBVar02157997 | |||||||||
| WBVar01619199 | |||||||||
| WBVar01619200 | |||||||||
| WBVar01619201 | |||||||||
| WBVar00496050 | |||||||||
| WBVar00496051 | |||||||||
| WBVar00496052 | |||||||||
| WBVar00496053 | |||||||||
| WBVar01499751 | |||||||||
| WBVar01499636 | |||||||||
| WBVar00075758 | |||||||||
| WBVar01987270 | |||||||||
| WBVar01124450 | |||||||||
| WBVar01124451 | |||||||||
| WBVar01124452 | |||||||||
| WBVar01124453 | |||||||||
| WBVar01124454 | |||||||||
| WBVar01124455 | |||||||||
| WBVar01124456 | |||||||||
| WBVar01124457 | |||||||||
| WBVar01124458 | |||||||||
| WBVar01124459 | |||||||||
| WBVar01124460 | |||||||||
| WBVar01124461 | |||||||||
| WBVar01124462 | |||||||||
| WBVar01124463 | |||||||||
| WBVar01124464 | |||||||||
| Strain | WBStrain00004659 | ||||||||
| WBStrain00004661 | |||||||||
| WBStrain00004730 | |||||||||
| WBStrain00004731 | |||||||||
| WBStrain00004762 | |||||||||
| WBStrain00005604 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Concise_description | bus-5 is an uncloned gene required for colonization by Microbacterium nematophilum, the tail-swelling response to M. nematophilum infection, and for fully normal cuticle antigens and traction during movement; bus-5 is also strongly required for cuticle integrity and for long-term survival during starvation. | Paper_evidence | WBPaper00026735 | |||||
| WBPaper00029153 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 16 Jul 2007 00:00:00 | ||||||||
| Automated_description | Expressed in hyp7 syncytium; hypodermal cell; and seam cell. Human ortholog(s) of this gene implicated in Catel Manzke syndrome. Is predicted to encode a protein with the following domains: NAD(P)-binding domain; NAD(P)-binding domain superfamily; and GDP-mannose 4,6 dehydratase. Is an ortholog of human TGDS (TDP-glucose 4,6-dehydratase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081122 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20324) | ||||
| Molecular_info | Corresponding_CDS | F53B1.4 | |||||||
| Corresponding_transcript | F53B1.4.1 | ||||||||
| Other_sequence (57) | |||||||||
| Associated_feature | WBsf237051 | ||||||||
| WBsf237052 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015469 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032665 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025578 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048070 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025577 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027359 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15742 | ||||||||
| Expr15743 | |||||||||
| Expr15744 | |||||||||
| Expr16442 | |||||||||
| Expr1014478 | |||||||||
| Expr1038066 | |||||||||
| Expr1151881 | |||||||||
| Expr2004032 | |||||||||
| Expr2022254 | |||||||||
| Drives_construct | WBCnstr00026306 | ||||||||
| WBCnstr00042503 | |||||||||
| WBCnstr00042504 | |||||||||
| WBCnstr00043024 | |||||||||
| Construct_product | WBCnstr00026306 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (268) | |||||||||
| Interaction | WBInteraction000538982 | ||||||||
| WBInteraction000558533 | |||||||||
| WBInteraction000565990 | |||||||||
| WBInteraction000576110 | |||||||||
| WBInteraction000576669 | |||||||||
| WBInteraction000579498 | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | X | Position | -17.0437 | |||||
| Positive | Positive_clone | F53B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5461 | |||||||
| Reference (12) | |||||||||
| Remark | [2020-07-30T16:54:45.386Z WBPerson1983] Gene Merged: bus-5 confirmed as this sequenced loci also known as rml-2 | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
