WormBase Tree Display for Gene: WBGene00044736
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| WBGene00044736 | SMap | S_parent | Sequence | Y38C1AA | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | CGC_name | gfrp-1 | Person_evidence | WBPerson384 | ||||||
| Sequence_name | Y38C1AA.13 | |||||||||
| Molecular_name | Y38C1AA.13 | |||||||||
| Y38C1AA.13.1 | ||||||||||
| CE44766 | ||||||||||
| Other_name | CELE_Y38C1AA.13 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | gfrp-1 | |||||||||
| DB_info | Database | WormFlux | gene | WBGene00044736 | ||||||
| NDB | locus_tag | CELE_Y38C1AA.13 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00044736|UniProtKB=D6RYD9 | ||||||||
| family | PTHR16852 | |||||||||
| NCBI | gene | 4363077 | ||||||||
| RefSeq | protein | NM_001392241.1 | ||||||||
| TREEFAM | TREEFAM_ID | TF329303 | ||||||||
| TrEMBL | UniProtAcc | D6RYD9 | ||||||||
| UniProt_GCRP | UniProtAcc | D6RYD9 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 27 Jan 2006 10:44:04 | WBPerson1867 | Event | Created | ||||
| 2 | 24 Mar 2010 15:51:17 | WBPerson1867 | Event | Split_into | WBGene00195063 | |||||
| 3 | 24 Mar 2010 15:51:33 | WBPerson1867 | Event | Changed_class | Pseudogene | CDS | ||||
| 4 | 27 Jul 2010 11:06:27 | WBPerson2970 | Name_change | CGC_name | gfrp-1 | |||||
| Split_into | WBGene00195063 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | gfrp | |||||||||
| Allele (24) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00007733 | |||||||||
| 00007734 | ||||||||||
| 00007735 | ||||||||||
| 00007736 | ||||||||||
| 00007737 | ||||||||||
| 00007738 | ||||||||||
| 00007739 | ||||||||||
| 00007740 | ||||||||||
| 00007741 | ||||||||||
| 00146123 | ||||||||||
| Contained_in_operon | CEOP4636 | |||||||||
| CEOP4007 | ||||||||||
| Ortholog (23) | ||||||||||
| Structured_description | Automated_description | Predicted to enable GTP cyclohydrolase binding activity. Predicted to be involved in negative regulation of biosynthetic process. Predicted to be located in cytoplasm and nucleus. Expressed in head; hyp7 syncytium; hypodermis; and neurons. Is an ortholog of human GCHFR (GTP cyclohydrolase I feedback regulator). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | Y38C1AA.13 | ||||||||
| Corresponding_CDS_history | Y38C1AA.13:wp162 | |||||||||
| Corresponding_transcript | Y38C1AA.13.1 | |||||||||
| Corresponding_pseudogene_history | Y38C1AA.13:wp213 | |||||||||
| Other_sequence | Dviv_isotig29687 | |||||||||
| Tcir_isotig08131 | ||||||||||
| Oden_isotig25139 | ||||||||||
| Tcol_isotig26642 | ||||||||||
| Dviv_isotig09365 | ||||||||||
| CJC05819_1 | ||||||||||
| Associated_feature | WBsf645743 | |||||||||
| WBsf655014 | ||||||||||
| Experimental_info | Expr_pattern | Expr11442 | ||||||||
| Expr12169 | ||||||||||
| Expr1040314 | ||||||||||
| Expr1159501 | ||||||||||
| Expr2012032 | ||||||||||
| Expr2030268 | ||||||||||
| Drives_construct | WBCnstr00020341 | |||||||||
| WBCnstr00020346 | ||||||||||
| Microarray_results | GPL19516_CGZ0044518 | |||||||||
| GPL21109_Y38C1AA.13 | ||||||||||
| Expression_cluster (52) | ||||||||||
| Map_info | Map | IV | Position | -26.8248 | Error | 0.00687 | ||||
| Positive | Positive_clone | Y38C1AA | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00046585 | |||||||||
| WBPaper00052649 | ||||||||||
| WBPaper00055090 | ||||||||||
| WBPaper00058547 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
