WormBase Tree Display for Gene: WBGene00045358
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| WBGene00045358 | SMap | S_parent | Sequence | C39E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mir-797 | Paper_evidence | WBPaper00028915 | |||||
| Person_evidence | WBPerson18 | ||||||||
| Sequence_name | C39E6.8 | ||||||||
| Molecular_name | C39E6.8 | ||||||||
| C39E6.8a | |||||||||
| C39E6.8b | |||||||||
| Other_name | cel-mir-797 | Remark | miRBase V21 import | ||||||
| Cel-Mir-2-o13 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_C39E6.8 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mir-797 | ||||||||
| DB_info | Database | miRBase | acc | MI0005198 | |||||
| MirGeneDB | cel | Cel-Mir-2-o13 | |||||||
| NDB | locus_tag | CELE_C39E6.8 | |||||||
| NCBI | gene | 6418840 | |||||||
| RefSeq | protein | NR_023994.2 | |||||||
| RNAcentral | URSid | URS000031E2D2 | |||||||
| URS00004B9DB9 | |||||||||
| URS00005DEFB4 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 05 Apr 2007 09:48:11 | WBPerson1867 | Event | Created | |||
| 2 | 05 Apr 2007 09:56:13 | WBPerson2970 | Name_change | CGC_name | mir-797 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar00090851 | ||||||||
| WBVar00502113 | |||||||||
| WBVar00502114 | |||||||||
| WBVar01499756 | |||||||||
| WBVar01499757 | |||||||||
| WBVar01498929 | |||||||||
| WBVar01500067 | |||||||||
| Strain | WBStrain00027546 | ||||||||
| In_cluster | MIR-2 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including prg-1; alg-1; and alg-2 based on RNA-seq studies. Is affected by multi-walled carbon nanotube based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C39E6.8 | |||||||
| C39E6.8a | |||||||||
| C39E6.8b | |||||||||
| Experimental_info | Expr_pattern | Expr8430 | |||||||
| Drives_construct | WBCnstr00005545 | ||||||||
| Expression_cluster (23) | |||||||||
| Interaction | WBInteraction000542491 | ||||||||
| Map_info | Map | X | Position | -6.71178 | Error | 0.005934 | |||
| Positive | Positive_clone | C39E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031335 | ||||||||
| WBPaper00032329 | |||||||||
| WBPaper00035664 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
