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WormBase Tree Display for Gene: WBGene00051667

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Name Class

WBGene00051667SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-dlg-1From_analysisInferred_from_orthology
Sequence_nameCRE00719
Molecular_nameCRE00719
CRE00719.1
RP28989
Other_namecr01.sctg0.wum.656
Public_nameCre-dlg-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-dlg-1
303 Jul 2008 11:44:26WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00719
Other_namecr01.sctg0.wum.656
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdlg
RNASeq_FPKMWBls:000000450.545From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
51.0943From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
51.6436From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002758.1654From_analysisRNASeq.remanei.WBls:0000027.control_mean
71.8203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
73.3256From_analysisRNASeq.remanei.WBls:0000027.control_median
74.8309From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
76.4374From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
9.5731From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003815.4168From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
29.4223From_analysisRNASeq.remanei.WBls:0000038.control_mean
35.7277From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
37.1224From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004110.5851From_analysisRNASeq.remanei.WBls:0000041.control_mean
11.5406From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
13.1107From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
16.0293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
7.44415From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
7.45128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
7.93479From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
9.73769From_analysisRNASeq.remanei.WBls:0000041.control_median
WBls:0000063 (12)
WBls:000010115.7231From_analysisRNASeq.remanei.total_over_all_stages.control_median
25.0828From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (33)
ParalogWBGene00051126Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00062326Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00064910Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00053186Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00056468Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: L27-1; SH3-like domain superfamily; L27_1; SH3 domain; L27 domain superfamily; Guanylate kinase/L-type calcium channel beta subunit; P-loop containing nucleoside triphosphate hydrolase; PDZ superfamily; Guanylate kinase; and PDZ domain. Is an ortholog of C. elegans dlg-1. In C. elegans, dlg-1 is involved in embryo development and zonula adherens assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00719
Corresponding_transcriptCRE00719.1
Other_sequence (87)
Experimental_infoExpr_patternExpr1110344
Microarray_resultsGPL14146_CRE00719_2528-2587_0.918_11_B
GPL14146_CRE00719_2657-2716_0.944_2_C
GPL14146_CRE00719_2816-2875_0.945_1_A
MethodGene