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WormBase Tree Display for Gene: WBGene00051982

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Name Class

WBGene00051982SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-sax-3From_analysisInferred_from_orthology
Sequence_nameCRE00399
Molecular_nameCRE00399
CRE00399.1
RP35274
Other_namecr01.sctg0.wum.964
Public_nameCre-sax-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:29WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00399
Other_namecr01.sctg0.wum.964
304 Jul 2008 11:06:33WBPerson4055Name_changeCGC_nameCre-sax-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsax
RNASeq_FPKMWBls:000000418.596From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
19.3844From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
20.1728From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002715.5535From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
16.5588From_analysisRNASeq.remanei.WBls:0000027.control_median
17.5641From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
17.6488From_analysisRNASeq.remanei.WBls:0000027.control_mean
29.7233From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.75428From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003811.409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
7.45122From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
9.51224From_analysisRNASeq.remanei.WBls:0000038.control_mean
9.67649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:00000413.69203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
4.17103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
4.33755From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
5.2426From_analysisRNASeq.remanei.WBls:0000041.control_median
5.35658From_analysisRNASeq.remanei.WBls:0000041.control_mean
6.14764From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
6.22861From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
7.56262From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:00001016.15093From_analysisRNASeq.remanei.total_over_all_stages.control_median
8.4923From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (34)
Paralog (38)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; and Immunoglobulin subtype. Is an ortholog of C. elegans sax-3. In C. elegans, sax-3 is involved in generation of neurons and regulation of sensory neuron axon guidance.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00399
Corresponding_transcriptCRE00399.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1100431
Microarray_resultsGPL14146_CRE00399_1312-1371_0.847_69_C
GPL14146_CRE00399_1556-1615_0.913_17_B
GPL14146_CRE00399_1834-1893_0.928_14_A
MethodGene