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WormBase Tree Display for Gene: WBGene00052055

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Name Class

WBGene00052055SMapS_parentSequenceCrem_Contig0
IdentityVersion4
NameCGC_nameCre-rsef-1From_analysisInferred_from_orthology
Sequence_nameCRE00443
Molecular_nameCRE00443
CRE00443.1
RP29148
Other_namecr01.sctg0.wum.1033
Cre-tag-312From_analysisInferred_from_orthology
Public_nameCre-rsef-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-tag-312
303 Jul 2008 11:44:29WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00443
Other_namecr01.sctg0.wum.1033
420 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-rsef-1
Other_nameCre-tag-312
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrsef
RNASeq_FPKMWBls:00000040.070438From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.140876From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.549505From_analysisRNASeq.remanei.WBls:0000027.control_median
0.72608From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.09901From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.80531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.173184From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.84366From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.00859From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
5.34921From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.488789From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.532389From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.573855From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.39192From_analysisRNASeq.remanei.WBls:0000041.control_median
2.49907From_analysisRNASeq.remanei.WBls:0000041.control_mean
4.20999From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
4.53257From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
4.65685From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (11)
WBls:00001010.851901From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.92722From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147290
00147291
00147292
Ortholog (29)
Paralog (33)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity; GTPase activity; and calcium ion binding activity. Is an ortholog of C. elegans rsef-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00443
Corresponding_transcriptCRE00443.1
Other_sequence (24)
Experimental_infoExpr_patternExpr1102320
Microarray_resultsGPL14146_CRE00443_1667-1726_0.919_11_B
GPL14146_CRE00443_1713-1772_0.939_1_C
GPL14146_CRE00443_1802-1861_0.864_33_A
MethodGene