WormBase Tree Display for Gene: WBGene00052545

WBGene00052545 SMap: S_parent: Sequence: Crem_Contig5
  Identity: Version: 4
    Name: CGC_name: Cre-atn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE27119
      Molecular_name: CRE27119
        CRE27119.1
        RP00290
      Other_name: cr01.sctg1.wum.420
        cr01.sctg1.wum.420.2
      Public_name: Cre-atn-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-atn-1
        3 03 Jul 2008 11:44:35 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE27119
                Other_name: cr01.sctg1.wum.420
        4 03 Jul 2008 11:48:40 WBPerson4055 Event: Acquires_merge: WBGene00052546
              Name_change: Other_name: cr01.sctg1.wum.420.2
      Acquires_merge: WBGene00052546
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atn
    RNASeq_FPKM: WBls:0000004 5.12905 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        5.32465 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.52024 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 27.305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        52.2802 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        56.9063 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        59.0089 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        61.1115 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        63.798 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 102.7 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        122.102 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        122.667 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        63.3315 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 26.3663 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        31.3245 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        39.2189 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        49.5371 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        50.041 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        60.8632 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        68.934 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        70.5157 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 69.7249 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        69.8035 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (26)
    Paralog (18)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Spectrin/alpha-actinin; EF-hand, Ca insensitive; Ca2+ insensitive EF hand; EF-hand domain pair; Calponin homology domain; CH domain superfamily; Calponin homology (CH) domain; and Spectrin repeat. Is an ortholog of C. elegans atn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE27119
    Corresponding_CDS_history: CRE27119:rp207
    Corresponding_transcript: CRE27119.1
    Other_sequence (84)
  Experimental_info: Expr_pattern: Expr1097549
    Microarray_results: GPL14146_CRE27119_2352-2411_0.911_7_C
      GPL14146_CRE27119_2536-2595_0.937_2_B
      GPL14146_CRE27119_2740-2799_0.736_220_A
  Method: Gene