Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00052844

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00052844SMapS_parentSequenceCrem_Contig13
IdentityVersion4
NameCGC_nameCre-sde-2From_analysisInferred_from_orthology
Sequence_nameCRE05391
Molecular_nameCRE05391
CRE05391.1
RP27157
Other_namecr01.sctg1.wum.711
cr01.sctg1.wum.711.2
Public_nameCre-sde-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:38WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE05391
Other_namecr01.sctg1.wum.711
303 Jul 2008 11:48:45WBPerson4055EventAcquires_mergeWBGene00052845
Name_changeOther_namecr01.sctg1.wum.711.2
404 Jun 2020 14:38:21WBPerson1983Name_changeCGC_nameCre-sde-2
Acquires_mergeWBGene00052845
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsde
RNASeq_FPKMWBls:000000464.5044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
68.2598From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
72.0151From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002717.0277From_analysisRNASeq.remanei.WBls:0000027.control_mean
17.9081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
19.462From_analysisRNASeq.remanei.WBls:0000027.control_median
21.0159From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
25.0931From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4.09369From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003814.8376From_analysisRNASeq.remanei.WBls:0000038.control_mean
19.3113From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.07259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
23.1288From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004117.6082From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
17.7671From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
20.0006From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
37.8489From_analysisRNASeq.remanei.WBls:0000041.control_median
37.9614From_analysisRNASeq.remanei.WBls:0000041.control_mean
55.6971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
57.2436From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
59.4519From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010119.0834From_analysisRNASeq.remanei.total_over_all_stages.control_median
25.2582From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00053912Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Replication stress response SDE2 C-terminal; Silencing defective 2 N-terminal ubiquitin domain; and Sde2, N-terminal ubiquitin domain. Is an ortholog of C. elegans sde-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE05391
Corresponding_transcriptCRE05391.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1096897
Microarray_resultsGPL14146_CRE05391_1371-1430_0.819_56_A
GPL14146_CRE05391_1391-1450_0.958_1_C
GPL14146_CRE05391_512-571_0.876_15_B
MethodGene