WormBase Tree Display for Gene: WBGene00053518

WBGene00053518 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-pqm-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE01775
      Molecular_name: CRE01775
        CRE01775.1
        RP01257
      Other_name: cr01.sctg2.wum.302
      Public_name: Cre-pqm-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-pqm-1
        3 03 Jul 2008 11:44:43 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE01775
                Other_name: cr01.sctg2.wum.302
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqm
    RNASeq_FPKM: WBls:0000004 1.53749 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        1.91857 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.29965 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 32.8082 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        37.2941 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        39.7714 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        46.7346 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        6.0104 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        63.6231 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 1.56052 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        37.99 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        52.3045 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        60.1049 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 21.4939 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        21.6665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        33.0168 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        39.4622 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        41.3299 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        49.6431 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        52.8101 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        58.1426 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 21.6282 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        25.3036 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (25)
    Paralog: WBGene00053798 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger C2H2 superfamily and Zinc finger C2H2-type. Is an ortholog of C. elegans pqm-1. In C. elegans, pqm-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule biosynthetic process; and regulation of vitellogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE01775
    Corresponding_transcript: CRE01775.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1107290
    Microarray_results: GPL14146_CRE01775_475-534_0.883_25_C
      GPL14146_CRE01775_692-751_0.832_42_B
      GPL14146_CRE01775_833-892_0.935_5_A
  Method: Gene