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WormBase Tree Display for Gene: WBGene00054173

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Name Class

WBGene00054173SMapS_parentSequenceCrem_Contig6
IdentityVersion3
NameCGC_nameCre-ssup-72From_analysisInferred_from_orthology
Sequence_nameCRE26495
Molecular_nameCRE26495
CRE26495.1
RP18164
Other_namecr01.sctg3.wum.193
Public_nameCre-ssup-72
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:48WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE26495
Other_namecr01.sctg3.wum.193
311 Nov 2008 17:09:12WBPerson2970Name_changeCGC_nameCre-ssup-72
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classssup
RNASeq_FPKMWBls:000000483.1045From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
91.1674From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
99.2302From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.5374From_analysisRNASeq.remanei.WBls:0000027.control_median
13.9048From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
16.1028From_analysisRNASeq.remanei.WBls:0000027.control_mean
3.0887From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
38.2476From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
9.17004From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003812.5297From_analysisRNASeq.remanei.WBls:0000038.control_mean
16.9682From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
18.2753From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2.34567From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004120.813From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
22.2668From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
23.0043From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
39.7144From_analysisRNASeq.remanei.WBls:0000041.control_median
41.2061From_analysisRNASeq.remanei.WBls:0000041.control_mean
56.4244From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
60.1593From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
64.5688From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010119.5441From_analysisRNASeq.remanei.total_over_all_stages.control_median
28.0399From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00149491
00149492
00149493
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable phosphoprotein phosphatase activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Is an ortholog of C. elegans ssup-72. In C. elegans, ssup-72 is involved in regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE26495
Corresponding_transcriptCRE26495.1
Other_sequence (33)
Experimental_infoExpr_patternExpr1113941
Microarray_resultsGPL14146_CRE26495_242-301_0.941_3_A
GPL14146_CRE26495_375-434_0.951_1_B
GPL14146_CRE26495_468-527_0.938_5_C
MethodGene