WormBase Tree Display for Gene: WBGene00054188

WBGene00054188 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-aff-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26217
      Molecular_name: CRE26217
        CRE26217.1
        RP19336
      Other_name: cr01.sctg3.wum.206
      Public_name: Cre-aff-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-aff-1
        3 03 Jul 2008 11:44:48 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26217
                Other_name: cr01.sctg3.wum.206
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aff
    RNASeq_FPKM: WBls:0000004 1.42044 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        2.03716 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.65389 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (49)
      WBls:0000027 0.19143 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.61571 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.03999 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.32199 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.05653 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.678432 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        10.3143 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        6.40891 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        8.23401 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 0.284299 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.333876 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.437003 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.455052 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.473101 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.544548 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.736201 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.00281 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 0.707317 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.74134 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (25)
    Paralog: WBGene00053872 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00068206 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cell-cell fusogen EFF/AFF and Type I membrane glycoproteins cell-cell fusogen. Is an ortholog of C. elegans aff-1. In C. elegans, aff-1 is involved in regulation of egg-laying behavior and syncytium formation by plasma membrane fusion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26217
    Corresponding_transcript: CRE26217.1
  Experimental_info: Expr_pattern: Expr1096518
    Microarray_results: GPL14146_CRE26217_1176-1235_0.910_11_B
      GPL14146_CRE26217_1373-1432_0.919_7_A
      GPL14146_CRE26217_1643-1702_0.936_3_C
  Method: Gene