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WormBase Tree Display for Gene: WBGene00054441

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Name Class

WBGene00054441SMapS_parentSequenceCrem_Contig6
IdentityVersion3
NameCGC_nameCre-rab-7From_analysisInferred_from_orthology
Sequence_nameCRE26358
Molecular_nameCRE26358
CRE26358.1
RP03561
CRE26358.2
Other_namecr01.sctg3.wum.441
Public_nameCre-rab-7
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-rab-7
303 Jul 2008 11:44:49WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE26358
Other_namecr01.sctg3.wum.441
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:0000004175.684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
189.329From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
202.973From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027110.361From_analysisRNASeq.remanei.WBls:0000027.control_mean
116.89From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
133.676From_analysisRNASeq.remanei.WBls:0000027.control_median
14.3117From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
150.463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
159.778From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:0000038108.128From_analysisRNASeq.remanei.WBls:0000038.control_mean
145.408From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
15.632From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
163.345From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041125.935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
131.712From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
137.739From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
154.208From_analysisRNASeq.remanei.WBls:0000041.control_median
159.741From_analysisRNASeq.remanei.WBls:0000041.control_mean
170.677From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
194.049From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
198.335From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:0000101120.398From_analysisRNASeq.remanei.total_over_all_stages.control_mean
123.568From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00149767
00149768
Ortholog (24)
Paralog (33)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-7. In C. elegans, rab-7 is involved in several processes, including oocyte growth; positive regulation of early endosome to late endosome transport; and vesicle-mediated transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE26358
Corresponding_transcriptCRE26358.1
CRE26358.2
Other_sequence (100)
Experimental_infoExpr_patternExpr1117900
Microarray_resultsGPL14146_CRE26358_135-194_0.908_6_B
GPL14146_CRE26358_531-590_0.859_30_C
GPL14146_CRE26358_539-598_0.943_3_A
MethodGene