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WormBase Tree Display for Gene: WBGene00054695

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Name Class

WBGene00054695SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-rpia-1From_analysisInferred_from_orthology
Sequence_nameCRE25085
Molecular_nameCRE25085
CRE25085.1
RP25759
Other_namecr01.sctg4.wum.56
Public_nameCre-rpia-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:51WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25085
Other_namecr01.sctg4.wum.56
324 Sep 2008 14:46:18WBPerson2970Name_changeCGC_nameCre-rpai-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpia
RNASeq_FPKMWBls:000000433.1034From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
35.826From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
38.5485From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002720.0532From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
45.6683From_analysisRNASeq.remanei.WBls:0000027.control_mean
47.9908From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
50.4886From_analysisRNASeq.remanei.WBls:0000027.control_median
52.9864From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
61.6429From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003822.8728From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
59.2364From_analysisRNASeq.remanei.WBls:0000038.control_mean
69.1614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
85.6751From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041111.639From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
113.848From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
44.4826From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
51.8249From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
52.1318From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
75.0738From_analysisRNASeq.remanei.WBls:0000041.control_median
78.657From_analysisRNASeq.remanei.WBls:0000041.control_mean
98.0157From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:000010152.5591From_analysisRNASeq.remanei.total_over_all_stages.control_median
59.0869From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00150014
00150015
Ortholog (28)
ParalogWBGene00083699Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ribose-5-phosphate isomerase activity. Predicted to be involved in pentose-phosphate shunt, non-oxidative branch. Is an ortholog of C. elegans rpia-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25085
Corresponding_transcriptCRE25085.1
Other_sequence (56)
Experimental_infoExpr_patternExpr1107797
Microarray_resultsGPL14146_CRE25085_165-224_0.877_16_C
GPL14146_CRE25085_433-492_0.948_1_B
GPL14146_CRE25085_739-798_0.893_11_A
MethodGene