WormBase Tree Display for Gene: WBGene00055771

WBGene00055771 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 4
    Name: CGC_name: Cre-unc-49 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04814
      Molecular_name: CRE04814
        CRE04814.1
        RP39028
      Other_name: cr01.sctg5.wum.480
        cr01.sctg5.wum.480.2
      Public_name: Cre-unc-49
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:58 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04814
                Other_name: cr01.sctg5.wum.480
        3 03 Jul 2008 11:48:41 WBPerson4055 Event: Acquires_merge: WBGene00055772
              Name_change: Other_name: cr01.sctg5.wum.480.2
        4 04 Jul 2008 11:06:36 WBPerson4055 Name_change: CGC_name: Cre-unc-49
      Acquires_merge: WBGene00055772
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0.620128 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.851264 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.0824 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 10.5483 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.09683 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        15.6689 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        6.71136 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        8.50635 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        8.62983 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.34707 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        13.0957 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        7.78444 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        9.91056 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 1.64014 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.85953 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.5634 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.0288 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.38767 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.49419 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.2642 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        5.50458 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 3.17234 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.35437 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00151247
      00151248
      00151249
      00151250
      00151251
      00151252
    Ortholog: WBGene00006784 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00008551 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00013914 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00037805 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00144273 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00157438 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00139250 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00151278 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00119924 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00130247 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129121 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00226150 Brugia malayi From_analysis: WormBase-Compara
      WBGene00133897 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00244711 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00113693 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g4076 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2958 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4857 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9434 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15298 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14166 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2620 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13596 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4329 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g436 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_12910.g23984 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g9603 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7353 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00128.g5094 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11418 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010455 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30124910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8886 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00263154 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287048 Trichuris muris From_analysis: WormBase-Compara
    Paralog (122)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04814
    Corresponding_transcript: CRE04814.1
    Other_sequence (43)
  Experimental_info: Expr_pattern: Expr1107557
    Microarray_results: GPL14146_CRE04814_1792-1851_0.855_46_C
      GPL14146_CRE04814_1884-1943_0.898_13_A
      GPL14146_CRE04814_720-779_0.815_78_B
  Method: Gene