Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00055829

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00055829SMapS_parentSequenceCrem_Contig12
IdentityVersion3
NameCGC_nameCre-sbsp-1From_analysisInferred_from_orthology
Sequence_nameCRE04627
Molecular_nameCRE04627
CRE04627.1
RP05931
Other_namecr01.sctg5.wum.536
Public_nameCre-sbsp-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:58WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04627
Other_namecr01.sctg5.wum.536
328 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCre-sbsp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsbsp
RNASeq_FPKMWBls:00000041.786From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.23547From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.68494From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.674475From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
5.64205From_analysisRNASeq.remanei.WBls:0000027.control_mean
6.62252From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.0792From_analysisRNASeq.remanei.WBls:0000027.control_median
7.53588From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
7.73532From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000380.409776From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.64951From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.0515From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
4.48726From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000415.25176From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
5.81163From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
6.77459From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
6.77473From_analysisRNASeq.remanei.WBls:0000041.control_median
6.77488From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
6.87719From_analysisRNASeq.remanei.WBls:0000041.control_mean
7.59107From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
9.05922From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (11)
WBls:00001014.93714From_analysisRNASeq.remanei.total_over_all_stages.control_mean
5.45582From_analysisRNASeq.remanei.total_over_all_stages.control_median
Ortholog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Somatomedin-B and thrombospondin type-1 domain-containing protein; Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; Somatomedin B domain; and Somatomedin B-like domain superfamily. Is an ortholog of C. elegans sbsp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04627
Corresponding_transcriptCRE04627.1
Other_sequenceFC540457.1
JO469447.1
ACC14698_1
JI173426.1
FC548848.1
Experimental_infoExpr_patternExpr1094714
Microarray_resultsGPL14146_CRE04627_1087-1146_0.951_4_C
GPL14146_CRE04627_1233-1292_0.966_1_B
GPL14146_CRE04627_955-1014_0.614_141_A
MethodGene