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WormBase Tree Display for Gene: WBGene00056072

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Name Class

WBGene00056072SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-tfg-1From_analysisInferred_from_orthology
Sequence_nameCRE28268
Molecular_nameCRE28268
CRE28268.1
RP16257
Other_namecr01.sctg6.wum.151
Public_nameCre-tfg-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-tfg-1
303 Jul 2008 11:45:01WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28268
Other_namecr01.sctg6.wum.151
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtfg
RNASeq_FPKMWBls:0000004290.703From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
306.583From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
322.463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:0000027112.632From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
302.356From_analysisRNASeq.remanei.WBls:0000027.control_mean
334.437From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
355.323From_analysisRNASeq.remanei.WBls:0000027.control_median
376.209From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
386.147From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:0000038156.252From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
243.325From_analysisRNASeq.remanei.WBls:0000038.control_mean
279.397From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
294.325From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:0000041175.336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
175.788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
184.034From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
191.219From_analysisRNASeq.remanei.WBls:0000041.control_median
191.64From_analysisRNASeq.remanei.WBls:0000041.control_mean
198.403From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
200.962From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
215.315From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:0000101201.876From_analysisRNASeq.remanei.total_over_all_stages.control_median
217.839From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00151585
00151586
00151587
Ortholog (20)
Structured_descriptionAutomated_descriptionPredicted to enable identical protein binding activity. Predicted to be involved in COPII vesicle coating. Is an ortholog of C. elegans tfg-1. In C. elegans, tfg-1 is involved in several processes, including cellular localization; regulation of cell growth; and regulation of cell size.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28268
Corresponding_transcriptCRE28268.1
Other_sequence (28)
Experimental_infoExpr_patternExpr1093496
Microarray_resultsGPL14146_CRE28268_1116-1175_0.660_125_C
GPL14146_CRE28268_1216-1275_0.626_144_B
GPL14146_CRE28268_940-999_0.885_6_A
MethodGene