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WormBase Tree Display for Gene: WBGene00056338

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Name Class

WBGene00056338SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-grh-1From_analysisInferred_from_orthology
Sequence_nameCRE28107
Molecular_nameCRE28107
CRE28107.1
RP30538
Other_namecr01.sctg6.wum.411
Public_nameCre-grh-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:39WBPerson2970Name_changeCGC_nameCre-grh-1
303 Jul 2008 11:45:03WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28107
Other_namecr01.sctg6.wum.411
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgrh
RNASeq_FPKMWBls:00000046.60736From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
6.61031From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
6.61326From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002744.6535From_analysisRNASeq.remanei.WBls:0000027.control_mean
46.4958From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
50.4571From_analysisRNASeq.remanei.WBls:0000027.control_median
54.4185From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
70.1624From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.53731From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003817.2174From_analysisRNASeq.remanei.WBls:0000038.control_mean
22.6801From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
24.0449From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
4.92707From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000411.28005From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.49794From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.59352From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.54986From_analysisRNASeq.remanei.WBls:0000041.control_median
2.74575From_analysisRNASeq.remanei.WBls:0000041.control_mean
3.5062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
4.25558From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
4.34119From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010111.3686From_analysisRNASeq.remanei.total_over_all_stages.control_mean
4.55575From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00151877
00151878
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans grh-1. In C. elegans, grh-1 is involved in defense response to bacterium; determination of adult lifespan; and ecdysis, collagen and cuticulin-based cuticle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28107
Corresponding_transcriptCRE28107.1
Other_sequence (75)
Experimental_infoExpr_patternExpr1105747
Microarray_resultsGPL14146_CRE28107_1323-1382_0.923_8_A
GPL14146_CRE28107_1469-1528_0.889_28_C
GPL14146_CRE28107_1662-1721_0.969_1_B
MethodGene