WormBase Tree Display for Gene: WBGene00056510

WBGene00056510 SMap: S_parent: Sequence: Crem_Contig2
  Identity: Version: 7
    Name: CGC_name: Cre-dkf-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE08647
      Molecular_name: CRE08647
        CRE08647.1
        RP28159
      Other_name: cr01.sctg7.wum.17
      Public_name: Cre-dkf-2.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:04 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE08647
                Other_name: cr01.sctg7.wum.17
        3 04 Jul 2008 11:06:37 WBPerson4055 Name_change: CGC_name: Cre-dkf-2
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        5 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Cre-dkf-2.1
        6 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        7 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cre-dkf-2.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dkf
    RNASeq_FPKM: WBls:0000004 3.6655 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        3.79036 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        3.91522 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.657797 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        10.755 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.67055 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        4.84307 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        5.01559 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        5.27473 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 0.666072 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.50785 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.23552 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        3.62195 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 10.0903 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        15.7012 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        17.1113 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        18.9359 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.57853 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.96725 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.24746 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        9.47433 From_analysis: RNASeq.remanei.WBls:0000041.control_median
      WBls:0000063 (12)
      WBls:0000101 3.64372 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        5.14681 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00152052
      00152053
      00152054
    Ortholog (26)
    Paralog (18)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Is an ortholog of C. elegans dkf-2. In C. elegans, dkf-2 is involved in defense response to bacterium; determination of adult lifespan; and signal transduction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE08647
    Corresponding_transcript: CRE08647.1
    Other_sequence (12)
  Experimental_info: Expr_pattern: Expr1092843
    Microarray_results: GPL14146_CRE08647_1214-1273_0.927_3_C
      GPL14146_CRE08647_1353-1412_0.940_1_A
      GPL14146_CRE08647_1397-1456_0.938_2_B
  Remark: [180319 gw3] The CGC name Cre-dkf-2 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00056511 Curator_confirmed: WBPerson4025
    [190507 pad] The CGC name Cre-dkf-2.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene