WormBase Tree Display for Gene: WBGene00056519

WBGene00056519 SMap: S_parent: Sequence: Crem_Contig2
  Identity: Version: 3
    Name: CGC_name: Cre-ctps-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE08653
      Molecular_name: CRE08653
        CRE08653.1
        RP12174
      Other_name: cr01.sctg7.wum.26
      Public_name: Cre-ctps-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:05 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE08653
                Other_name: cr01.sctg7.wum.26
        3 27 Apr 2012 17:09:23 WBPerson2970 Name_change: CGC_name: Cre-ctps-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ctps
    RNASeq_FPKM: WBls:0000004 221.588 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        225.225 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        228.861 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 112.579 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        138.976 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        141.906 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        144.835 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        151.181 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        15.3233 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 112.238 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        115.692 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        25.1567 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        84.3622 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 146.575 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        156.737 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        162.224 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        28.2418 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        33.1396 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        33.8599 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        90.2175 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        93.4629 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 83.6736 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        91.7575 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00152063
      00152064
    Ortholog (34)
    Paralog: WBGene00086044 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable CTP synthase activity. Predicted to be involved in pyrimidine nucleotide biosynthetic process. Is an ortholog of C. elegans ctps-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE08653
    Corresponding_CDS_history: CRE08653:rp215
    Corresponding_transcript: CRE08653.1
    Other_sequence (50)
  Experimental_info: Expr_pattern: Expr1107928
    Microarray_results: GPL14146_CRE08653_1407-1466_0.814_81_C
      GPL14146_CRE08653_1567-1626_0.811_88_A
      GPL14146_CRE08653_1686-1745_0.944_1_B
  Method: Gene