WormBase Tree Display for Gene: WBGene00057397

WBGene00057397 SMap: S_parent: Sequence: Crem_Contig17
  Identity: Version: 3
    Name: CGC_name: Cre-vhp-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE11759
      Molecular_name: CRE11759
        CRE11759.1
        RP33619
      Other_name: cr01.sctg9.wum.132
      Public_name: Cre-vhp-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-vhp-1
        3 03 Jul 2008 11:45:11 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE11759
                Other_name: cr01.sctg9.wum.132
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vhp
    RNASeq_FPKM: WBls:0000004 27.74 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        28.5211 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        29.3022 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 114.337 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        117.122 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        119.907 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        120.143 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        14.8799 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        92.3167 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 20.5223 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        49.5776 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        61.0483 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        67.1622 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 21.0261 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        23.3767 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        26.8458 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        29.6318 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        31.2673 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        32.4177 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        39.9993 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        43.9384 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 38.7828 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        45.6826 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00152865
      00152866
      00152867
      00152868
    Ortholog (29)
    Paralog: WBGene00067090 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073420 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051618 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00053946 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054992 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055470 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065448 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065671 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00073358 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00079849 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans vhp-1. In C. elegans, vhp-1 is involved in several processes, including regulation of cellular response to stress; regulation of defense response to bacterium; and regulation of protein localization to nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE11759
    Corresponding_transcript: CRE11759.1
    Other_sequence (27)
  Experimental_info: Expr_pattern: Expr1110110
    Microarray_results: GPL14146_CRE11759_1356-1415_0.921_9_B
      GPL14146_CRE11759_1415-1474_0.924_8_A
      GPL14146_CRE11759_798-857_0.851_60_C
  Method: Gene