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WormBase Tree Display for Gene: WBGene00057480

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Name Class

WBGene00057480SMapS_parentSequenceCrem_Contig17
IdentityVersion6
NameCGC_nameCre-btbd-10From_analysisInferred_from_orthology
Sequence_nameCRE11718
Molecular_nameCRE11718
CRE11718.1
RP24293
Other_namecr01.sctg9.wum.210
cr01.sctg9.wum.210.2
Cre-snpc-1.4From_analysisInferred_from_orthology
Public_nameCre-btbd-10
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:45:12WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE11718
Other_namecr01.sctg9.wum.210
303 Jul 2008 11:48:44WBPerson4055EventAcquires_mergeWBGene00057481
Name_changeOther_namecr01.sctg9.wum.210.2
411 Apr 2012 13:56:30WBPerson2970Name_changeCGC_nameCre-btbd-10
504 Jul 2013 14:05:09WBPerson2970Name_changeCGC_nameCre-snpc-1.4
Other_nameCre-btbd-10
604 Mar 2014 11:26:21WBPerson2970Name_changeCGC_nameCre-btbd-10
Other_nameCre-snpc-1.4
Acquires_mergeWBGene00057481
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbtbd
RNASeq_FPKMWBls:0000004102.504From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
93.8642From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
98.1841From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (53)
WBls:000002712.7984From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
42.0188From_analysisRNASeq.remanei.WBls:0000027.control_mean
44.8513From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
47.4285From_analysisRNASeq.remanei.WBls:0000027.control_median
50.0056From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
60.4199From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003815.4553From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
32.6363From_analysisRNASeq.remanei.WBls:0000038.control_mean
40.5336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
41.9199From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:000004129.7004From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
32.1826From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
33.4953From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
53.9648From_analysisRNASeq.remanei.WBls:0000041.control_median
54.8954From_analysisRNASeq.remanei.WBls:0000041.control_mean
74.4343From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
75.442From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
84.1179From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010133.1101From_analysisRNASeq.remanei.total_over_all_stages.control_median
41.6955From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: BTBD10/KCTD20; SKP1/BTB/POZ domain superfamily; BTB/POZ domain; and BTBD10/KCTD20, BTB/POZ domain. Is an ortholog of C. elegans btbd-10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE11718
Corresponding_transcriptCRE11718.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1116550
Microarray_resultsGPL14146_CRE11718_1290-1349_0.902_8_B
GPL14146_CRE11718_1380-1439_0.930_3_A
GPL14146_CRE11718_907-966_0.840_39_C
MethodGene