WormBase Tree Display for Gene: WBGene00057482

WBGene00057482 SMap: S_parent: Sequence: Crem_Contig17
  Identity: Version: 3
    Name: CGC_name: Cre-sgt-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE11877
      Molecular_name: CRE11877
        CRE11877.1
        RP12790
      Other_name: cr01.sctg9.wum.211
      Public_name: Cre-sgt-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-sgt-1
        3 03 Jul 2008 11:45:12 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE11877
                Other_name: cr01.sctg9.wum.211
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sgt
    RNASeq_FPKM: WBls:0000004 229.571 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        234.949 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        240.326 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 241.122 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        280.709 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        288.042 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        295.375 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        338.627 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        49.7791 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 231.467 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        305.312 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        312.113 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        76.9767 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 184.04 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        190.402 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        195.388 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        198.147 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        200.906 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        210.73 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        242.715 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        250.93 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 247.787 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        281.966 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (37)
    Paralog: WBGene00055177 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00055876 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00057325 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00059334 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00063582 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00064280 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064906 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075561 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Homodimerisation domain of SGTA; Tetratricopeptide repeat; Tetratricopeptide repeat 1; SGTA, homodimerisation domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sgt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE11877
    Corresponding_transcript: CRE11877.1
    Other_sequence (93)
  Experimental_info: Expr_pattern: Expr1094955
    Microarray_results: GPL14146_CRE11877_897-956_0.970_1_A
  Method: Gene