WormBase Tree Display for Gene: WBGene00058452

WBGene00058452 SMap: S_parent: Sequence: Crem_Contig15
  Identity: Version: 5
    Name: CGC_name: Cre-vab-3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07226
      Molecular_name: CRE07226
        CRE07226.1
        RP41854
      Other_name: cr01.sctg11.wum.285
        cr01.sctg11.wum.285.2
      Public_name: Cre-vab-3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:18 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07226
                Other_name: cr01.sctg11.wum.285
        3 03 Jul 2008 11:48:39 WBPerson4055 Event: Acquires_merge: WBGene00058454
        4 03 Jul 2008 11:48:44 WBPerson4055 Event: Acquires_merge: WBGene00058453
              Name_change: Other_name: cr01.sctg11.wum.285.2
        5 04 Jul 2008 11:06:39 WBPerson4055 Name_change: CGC_name: Cre-vab-3
      Acquires_merge: WBGene00058454
        WBGene00058453
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vab
    RNASeq_FPKM: WBls:0000004 8.03771 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        8.24933 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        8.46095 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 3.28466 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        7.56275 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        8.26709 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        8.51869 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        8.77029 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        9.92894 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 1.02338 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.80565 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.29665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        4.09691 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.785412 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.914312 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.30351 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.79086 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.79813 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.27821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.49335 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.01396 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (11)
      WBls:0000101 2.23324 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.05866 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00153875
      00153876
    Ortholog (31)
    Paralog (21)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans vab-3. In C. elegans, vab-3 is involved in several processes, including male anatomical structure morphogenesis; negative regulation of distal tip cell migration; and positive regulation of glial cell differentiation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07226
    Corresponding_transcript: CRE07226.1
    Other_sequence (19)
  Experimental_info: Expr_pattern: Expr1101892
    Microarray_results: GPL14146_CRE07226_1346-1405_0.848_41_A
      GPL14146_CRE07226_286-345_0.799_69_B
      GPL14146_CRE07226_76-135_0.742_96_C
  Method: Gene