WormBase Tree Display for Gene: WBGene00058596

WBGene00058596 SMap: S_parent: Sequence: Crem_Contig27
  Identity: Version: 3
    Name: CGC_name: Cre-dsc-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE15418
      Molecular_name: CRE15418
        CRE15418.1
        RP30924
      Other_name: cr01.sctg12.wum.101
      Public_name: Cre-dsc-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:19 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE15418
                Other_name: cr01.sctg12.wum.101
        3 04 Jul 2008 11:06:39 WBPerson4055 Name_change: CGC_name: Cre-dsc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dsc
    RNASeq_FPKM: WBls:0000004 0.087155 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.17431 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (51)
      WBls:0000027 0.743335 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.48667 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.52861 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.62776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.295736 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.3648 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        0.522407 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.029474 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.146369 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.183175 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.203415 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.204272 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.223656 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.268692 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.374265 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.0605 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.224033 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.380968 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0.014737 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.346407 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00154031
    Ortholog (21)
    Paralog (15)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans dsc-1. In C. elegans, dsc-1 is involved in positive regulation of defecation rhythm and regulation of DNA-templated transcription. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE15418
    Corresponding_transcript: CRE15418.1
    Other_sequence: TDC00719_1
      CB038760.1
      JI237937.1
      Acan_isotig13973
  Experimental_info: Expr_pattern: Expr1111632
    Microarray_results: GPL14146_CRE15418_541-600_0.923_5_B
      GPL14146_CRE15418_554-613_0.905_16_C
      GPL14146_CRE15418_680-739_0.914_11_A
  Method: Gene