WormBase Tree Display for Gene: WBGene00058752

WBGene00058752 SMap: S_parent: Sequence: Crem_Contig43
  Identity: Version: 3
    Name: CGC_name: Cre-hpl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE19236
      Molecular_name: CRE19236
        CRE19236.1
        RP18088
      Other_name: cr01.sctg12.wum.251
      Public_name: Cre-hpl-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE19236
                Other_name: cr01.sctg12.wum.251
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cre-hpl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpl
    RNASeq_FPKM: WBls:0000004 10.4098 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        11.8799 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        8.93965 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.6674 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3.63204 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        4.24612 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        5.82484 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        6.03593 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.540191 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        10.2516 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        6.20227 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.81502 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 2.73924 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.81334 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.3446 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.6386 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.80608 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.93259 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.6045 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.40222 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 4.26855 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.81767 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00154218
      00154219
      00154220
    Ortholog (26)
    Paralog: WBGene00055817 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070936 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            GeneACeDB-Compara
      WBGene00060127 Caenorhabditis remanei From_analysis: Inparanoid_8
            GeneACeDB-Compara
      WBGene00080595 Caenorhabditis remanei From_analysis: Inparanoid_8
            GeneACeDB-Compara
      WBGene00062358 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00063985 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00071525 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00078054 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable methylated histone binding activity. Predicted to be involved in chromosome attachment to the nuclear envelope. Predicted to be located in nucleus. Is an ortholog of C. elegans hpl-1. In C. elegans, hpl-1 is involved in several processes, including developmental process involved in reproduction; negative regulation of vulval development; and positive regulation of growth rate. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE19236
    Corresponding_transcript: CRE19236.1
    Other_sequence: CRC04610_1
      CR05640
  Experimental_info: Expr_pattern: Expr1106850
    Microarray_results: GPL14146_CRE19236_533-592_0.734_33_A
  Method: Gene