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WormBase Tree Display for Gene: WBGene00059148

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Name Class

WBGene00059148SMapS_parentSequenceCrem_Contig18
IdentityVersion4
NameCGC_nameCre-siah-1.2From_analysisInferred_from_orthology
Sequence_nameCRE10953
Molecular_nameCRE10953
CRE10953.1
RP31570
Other_namecr01.sctg14.wum.7
Cre-siah-1From_analysisInferred_from_orthology
Public_nameCre-siah-1.2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:47WBPerson2970Name_changeCGC_nameCre-siah-1
303 Jul 2008 11:45:22WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE10953
Other_namecr01.sctg14.wum.7
420 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-siah-1.2
Other_nameCre-siah-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsiah
RNASeq_FPKMWBls:000000417.5218From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
17.9512From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
18.3806From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002716.9966From_analysisRNASeq.remanei.WBls:0000027.control_mean
18.0033From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
19.2545From_analysisRNASeq.remanei.WBls:0000027.control_median
20.5057From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
24.6647From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
4.81265From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003816.8936From_analysisRNASeq.remanei.WBls:0000038.control_mean
21.7754From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
22.0134From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
6.89208From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004115.8381From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
17.3055From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
22.7695From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
28.1835From_analysisRNASeq.remanei.WBls:0000041.control_mean
28.4923From_analysisRNASeq.remanei.WBls:0000041.control_median
34.215From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
38.7744From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
40.1988From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010118.7701From_analysisRNASeq.remanei.total_over_all_stages.control_median
19.107From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00154656
00154657
00154658
Ortholog (19)
ParalogWBGene00074681Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Is an ortholog of C. elegans siah-1. In C. elegans, siah-1 is involved in programmed cell death involved in cell development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE10953
Corresponding_transcriptCRE10953.1
Other_sequence (20)
MethodGene