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WormBase Tree Display for Gene: WBGene00059855

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Name Class

WBGene00059855SMapS_parentSequenceCrem_Contig9
IdentityVersion3
NameCGC_nameCre-blmp-1From_analysisInferred_from_orthology
Sequence_nameCRE29848
Molecular_nameCRE29848
CRE29848.1
RP48251
Other_namecr01.sctg16.wum.29
Public_nameCre-blmp-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-blmp-1
303 Jul 2008 11:45:26WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29848
Other_namecr01.sctg16.wum.29
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classblmp
RNASeq_FPKMWBls:00000047.35208From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
7.9158From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
8.47953From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002713.0409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
52.418From_analysisRNASeq.remanei.WBls:0000027.control_mean
54.3975From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
61.3844From_analysisRNASeq.remanei.WBls:0000027.control_median
68.3714From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
73.8622From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003811.3859From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
36.7562From_analysisRNASeq.remanei.WBls:0000038.control_mean
46.4262From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
52.4566From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000412.19811From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.45866From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
3.17606From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
3.52483From_analysisRNASeq.remanei.WBls:0000041.control_mean
3.68149From_analysisRNASeq.remanei.WBls:0000041.control_median
4.18692From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
4.406From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
4.72325From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010115.6616From_analysisRNASeq.remanei.total_over_all_stages.control_mean
5.62642From_analysisRNASeq.remanei.total_over_all_stages.control_median
Ortholog (30)
Paralog (41)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. Is an ortholog of C. elegans blmp-1. In C. elegans, blmp-1 is involved in negative regulation of distal tip cell migration; regulation of developmental process; and regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29848
Corresponding_transcriptCRE29848.1
Other_sequence (25)
Experimental_infoExpr_patternExpr1092665
Microarray_resultsGPL14146_CRE29848_1663-1722_0.902_26_B
GPL14146_CRE29848_1711-1770_0.904_23_C
GPL14146_CRE29848_1780-1839_0.904_22_A
MethodGene