WormBase Tree Display for Gene: WBGene00059932

WBGene00059932 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name (5)
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:27 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29589
                Other_name: cr01.sctg16.wum.105
        3 04 Jul 2008 11:06:40 WBPerson4055 Name_change: CGC_name: Cre-mef-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mef
    RNASeq_FPKM: WBls:0000004 2.17464 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        2.66702 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        3.1594 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 11.9476 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        19.8079 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        22.0502 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        22.9137 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        24.2926 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        35.6065 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 12.4705 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        14.5099 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        18.2273 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        4.67418 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 10.9671 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        13.4993 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        14.94 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.85928 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        6.3206 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        8.11198 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        9.53954 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        9.94971 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 10.6209 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        10.7648 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155403
      00155404
    Ortholog: WBGene00003182 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033391 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153281 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00151929 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130492 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
      WBGene00094443 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00226531 Brugia malayi From_analysis: WormBase-Compara
      WBGene00237775 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9979 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2619 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17023 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15460 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20907 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10421 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17336 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7595 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15042 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24179 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00182.g6398 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mef-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold501.g2297 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_05155 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09882 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19655 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10115100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1743 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00261121 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302572 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00064271 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity and protein dimerization activity. Is an ortholog of C. elegans mef-2. In C. elegans, mef-2 is involved in several processes, including receptor guanylyl cyclase signaling pathway; regulation of acetylcholine secretion, neurotransmission; and regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29589
    Corresponding_transcript: CRE29589.1
    Other_sequence (17)
  Experimental_info: Expr_pattern: Expr1093021
    Microarray_results: GPL14146_CRE29589_184-243_0.773_75_C
      GPL14146_CRE29589_737-796_0.933_10_B
      GPL14146_CRE29589_985-1044_0.969_1_A
  Method: Gene