WormBase Tree Display for Gene: WBGene00060001

WBGene00060001 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-sup-17 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29549
      Molecular_name: CRE29549
        CRE29549.1
        RP47424
      Other_name: cr01.sctg16.wum.171
      Public_name: Cre-sup-17
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-sup-17
        3 03 Jul 2008 11:45:30 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29549
                Other_name: cr01.sctg16.wum.171
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sup
    RNASeq_FPKM: WBls:0000004 101.033 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        102.445 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        103.857 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 25.0388 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        27.1672 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        29.1747 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        31.1821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        31.8755 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        9.9305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 16.9335 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        21.0215 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        21.5255 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        8.25358 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 43.708 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        44.3178 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        7.65048 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        77.5591 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        78.9562 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        83.3846 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        8.49937 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        9.85684 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 21.2735 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        30.6974 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155483
    Ortholog (32)
    Paralog: WBGene00051257 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00051561 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00063439 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065291 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00066068 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00077875 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metallopeptidase activity. Is an ortholog of C. elegans sup-17. In C. elegans, sup-17 is involved in several processes, including nematode male tail tip morphogenesis; positive regulation of transforming growth factor beta receptor signaling pathway; and vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29549
    Corresponding_transcript: CRE29549.1
    Other_sequence (26)
  Experimental_info: Expr_pattern: Expr1104331
    Microarray_results: GPL14146_CRE29549_2118-2177_0.895_16_B
      GPL14146_CRE29549_2161-2220_0.918_6_C
      GPL14146_CRE29549_2363-2422_0.912_8_A
  Method: Gene