WormBase Tree Display for Gene: WBGene00060220

WBGene00060220 SMap: S_parent: Sequence: Crem_Contig24
  Identity: Version: 5
    Name: CGC_name: Cre-cdo-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE17101
      Molecular_name: CRE17101
        CRE17101.1
        RP14357
      Other_name: cr01.sctg17.wum.105
      Public_name: Cre-cdo-1.2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE17101
                Other_name: cr01.sctg17.wum.105
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-cdo-1.2
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cre-cdo-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdo
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (52)
      WBls:0000027 0.838278 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0.847574 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0.856871 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.966455 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.17067 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 16.0426 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        20.9685 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        2.16703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        24.9923 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 13.8554 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        14.0719 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        14.4414 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        15.9881 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        17.0535 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        17.5349 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        20.5388 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        21.8788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 13.7232 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        15.9881 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00155682
      00155683
    Ortholog (18)
    Paralog: WBGene00067000 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable iron ion binding activity and oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen. Is an ortholog of C. elegans cdo-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE17101
    Corresponding_transcript: CRE17101.1
    Other_sequence (38)
  Experimental_info: Expr_pattern: Expr1108378
    Microarray_results: GPL14146_CRE17101_298-357_0.933_1_A
  Remark: [190208 pad] The CGC name Cre-cdo-1.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene